Aminobacter sp. MSH1: CO731_01032
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Entry
CO731_01032 CDS
T05420
Symbol
ddpA_4
Name
(GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
amih
Aminobacter sp. MSH1
Pathway
amih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CO731_01032 (ddpA_4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amih02000
]
CO731_01032 (ddpA_4)
Transporters [BR:
amih02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CO731_01032 (ddpA_4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TatD_DNase
Motif
Other DBs
NCBI-ProteinID:
AWC21580
UniProt:
A0A2S0XEY1
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All DBs
Position
complement(1056449..1058089)
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AA seq
546 aa
AA seq
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MMLGKMNEQFRLLLAGAALSAMVFAAPALAVTPADTLVQAWAIDDTITLDPAESFELSPA
EFLGNAYDMLVRLDINDTTKVRPGVAESWTVSDDGLTYTFKLKPGLKFASGNPITAADVA
WSFERVVKLDKSPAFILTQFGLTKDNVAEKAKAADDSTFVFTVDKSYAPSFVLNCLTATV
GAVMDSKLVLEHVAPVTPTDDYKFDNDFGNGWLKTGYAGSGPFKIRDWRANEILVLERND
NYYGDKPALARVIYRHVKESATQRLMLEAGDIDVARNLEPGDLEAVSKNAELTTTSAPKG
TVYYISLNQKNENLAKPEVRQALKYLVDYDAIGATLIKGIGEIRQTYQAKGVLGALDSNP
FTFDPAKAKELLEKAGLKDGFSVTMDVRNTQPVTGIAESFQQTVGQAGVKVEIIPGDGKQ
TLTKYRARNHDMYIGQWGMDYWDPNSNAETFTSNPNNADDGTVKTLAWRNAWDVPELTEK
TKAALLERDNDKRAAMYKELQQAALDTSPFVLIFQQTEVAGLRGNVKNYKLGPNFDSNFV
APVTKE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttggtaaaatgaacgaacaattccgtctgctgcttgcaggcgctgccctttcg
gcgatggtctttgcggcacccgcgcttgcggtgacgccggccgacacgctggtccaggcc
tgggccatcgacgacaccatcacgctcgacccggccgaatccttcgagctcagcccggcc
gaattcctcggcaacgcctatgacatgctggtgcgcctcgacatcaacgacaccaccaag
gtgcgccccggcgtcgccgagagctggaccgtttccgatgacggcctgacctacaccttc
aagctcaagcccggcctgaaattcgcctccggcaacccgatcaccgccgccgacgtcgcc
tggtcgttcgagcgcgtcgtcaagctcgacaagagcccggccttcatcctcacccagttc
ggcctgaccaaggacaacgtcgccgagaaggccaaggccgccgacgacagcaccttcgtc
ttcaccgtcgacaagtcctatgcgccgtccttcgtgctcaactgcctgaccgccaccgtc
ggcgcggtgatggacagcaagctggtgctagagcatgtcgccccggtcacgccgaccgac
gactacaagttcgacaacgacttcggcaatggctggctcaagaccggctatgccggctcg
ggaccgttcaagatccgcgactggcgtgccaacgagatcctcgtgctcgagcgcaacgac
aactactatggcgacaagccggcactggcccgcgtcatttatcgccacgtcaaggaaagc
gccacccagcgcctgatgctcgaagccggcgacatcgatgtcgcccgcaaccttgagccg
ggcgacctcgaagcggtttcgaagaacgccgagctgaccaccaccagcgcgcccaagggc
acggtctattacatcagcctcaaccagaagaacgagaacctggccaagccggaagtgcgc
caggcgctcaagtacctggtcgactacgacgccatcggcgccacgctgatcaagggcatc
ggcgaaatccgccagacctaccaggccaagggcgtgctcggcgcgctcgactcgaacccg
ttcaccttcgaccccgccaaggccaaggaactgctggagaaggcaggcctgaaggacggc
ttctcggtcaccatggatgtgcgcaacacccagcctgtcaccggcatcgccgaatcgttc
cagcagaccgtcggccaggccggcgtcaaggttgagatcatccccggcgacggcaagcag
acgctgaccaagtaccgcgcccgcaaccacgacatgtatatcggccagtggggcatggac
tactgggatccgaactccaacgccgagaccttcacctccaacccgaacaacgccgacgac
ggcaccgtgaagacgctggcctggcgcaacgcctgggacgtgccggagctgaccgagaag
accaaggcagcccttctggagcgcgacaacgacaagcgcgccgccatgtacaaggaactg
cagcaggcggcactggacaccagcccgttcgtgctgatcttccagcagaccgaggttgcc
ggcctgcgcggcaacgtcaagaactacaagctcgggccgaacttcgattcgaacttcgtc
gcccccgtgaccaaggaatga
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