Aminobacter sp. MSH1: CO731_02013
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Entry
CO731_02013 CDS
T05420
Symbol
cdhR_2
Name
(GenBank) Carnitine catabolism transcriptional activator
Organism
amih
Aminobacter sp. MSH1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
TetR_N
HTH_AsnC-type
HTH_Tnp_ISL3
MerR
Motif
Other DBs
NCBI-ProteinID:
AWC22549
UniProt:
A0A2S0XHP8
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Position
complement(2010978..2011958)
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AA seq
326 aa
AA seq
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MTKSEKPTIFREERSPLKVTMLVFSGASIMCVASAVDPLRAANRIAGETHFDFRLVSATG
EPAITTCGLPVAVSGAFDPDDACDVLMVIAGFGTQGYTTSKLLGGIRRCARQARAAGGIE
AGTWLVARAGLLEGRTATTHWEDMEDFAAAFPEVEVRPDRYIIDGPVFTSGGAAPTFDLM
LHLVRSRLGMATALDVASVFIYDQSRAATDAQPLVSLGRLDGYDPRLAQAIRLMEGHVDQ
PLTIAAIAKRAGVTARTLESIFRASIGETPGAYYLRLRLNAARRLVVDTRVSMAEVAERT
GFSSAAAFSRSFSRAFGTPPVRMRKG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaagcgaaaagccgacaatctttcgcgaagagcgctcgccgctcaaggtgacg
atgctggtcttctccggcgcgtccatcatgtgcgtggcatcggccgtcgaccccctgcgc
gccgccaaccgcattgccggcgagacgcatttcgacttccggctggtatccgccaccggc
gagccggcgatcaccacatgcggcctgcctgtggcggtctccggcgccttcgaccccgac
gatgcctgcgacgtgctgatggtcatcgccggcttcggcacccagggatacaccacgtcg
aagctgctcggcggcatcaggcgctgcgcccgccaggcccgcgcggccggcggcatcgag
gcaggcacctggctggtcgcccgcgccgggctgctggaaggccgcactgccaccactcat
tgggaggacatggaggattttgccgcggcctttcctgaggtcgaggtccgtcccgaccgc
tacatcatcgacggcccggttttcacctcgggcggtgcggcgcccaccttcgacctgatg
ctgcacctggtgcgctcgcggctcggcatggcgaccgcgctcgatgtcgccagcgtcttc
atctacgaccagtcgcgcgccgccaccgacgcgcagccgctggtctcgctcggccggctc
gacggctacgacccgcgtctcgcccaggcgatccgcctgatggagggccatgtcgaccag
ccgctgacgattgccgcgatcgcaaagcgtgcaggcgtcacggcgcggacgctcgaaagc
atcttccgcgcctcgatcggcgagacgcccggcgcctactatctcaggctgagattgaac
gccgcgcgacggctggttgtcgacacccgcgtcagcatggccgaggtcgccgagcggacc
ggcttttcctcggctgccgccttctcccgcagcttttcccgcgccttcggcacgccgccg
gtgaggatgcgcaagggctga
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