Aminobacter sp. MSH1: CO731_02801
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Entry
CO731_02801 CDS
T05420
Symbol
polC_1
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amih
Aminobacter sp. MSH1
Pathway
amih03030
DNA replication
amih03430
Mismatch repair
amih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CO731_02801 (polC_1)
03430 Mismatch repair
CO731_02801 (polC_1)
03440 Homologous recombination
CO731_02801 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amih03032
]
CO731_02801 (polC_1)
03400 DNA repair and recombination proteins [BR:
amih03400
]
CO731_02801 (polC_1)
Enzymes [BR:
amih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CO731_02801 (polC_1)
DNA replication proteins [BR:
amih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CO731_02801 (polC_1)
DNA repair and recombination proteins [BR:
amih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CO731_02801 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AWC23332
UniProt:
A0A2S0XJU3
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All DBs
Position
2843165..2843767
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AA seq
200 aa
AA seq
DB search
MRALAIDFETANEQRSSPCSVGLAWIEDGAVIRVEERLIRPKDMRFSRFNIAVHGIRPEH
VEDAAEFPEVMEEFEEDLGDALVIAHNAAFDMSVMRATYALYGIACPDIDYVCTLKMARM
VWQDLASHRLNEVSRHIDFSFKHHNAAEDAHACGEVALAVARKLNVSAMRDLPTRLEMTT
GRLHASGYSPCSVKRAKPAR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcacttgccatcgacttcgaaactgccaacgagcagcgcagcagcccgtgctcg
gtgggcctggcctggatagaggacggcgcggtcatccgcgtggaagagaggctcattcgt
ccgaaggacatgcgtttttcgcgtttcaacatcgctgtccacggcattcgccccgagcat
gtcgaggatgcggcggagtttcccgaggtgatggaggagttcgaagaagatctcggcgat
gcgctggtcattgcccacaacgccgctttcgacatgagcgtcatgcgggcgacctatgcg
ctgtatggcatcgcctgtcctgatatcgactatgtctgcacgctgaagatggcaagaatg
gtgtggcaggaccttgcctcgcaccggctcaacgaggtgtcgcgccacatcgatttctcg
ttcaagcaccacaatgcggccgaggacgcgcatgcctgcggcgaggtggcattggcggtt
gcgcgcaagctcaacgtctctgcgatgcgcgatctgccgaccaggctcgagatgacgacg
ggccgtctccacgccagcggttactcgccttgctcggtgaagcgagccaaaccggcgcga
tag
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integrated database retrieval system