Aminobacter sp. MSH1: CO731_03328
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Entry
CO731_03328 CDS
T05420
Symbol
dacF_2
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacF precursor
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
amih
Aminobacter sp. MSH1
Pathway
amih00550
Peptidoglycan biosynthesis
amih01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CO731_03328 (dacF_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amih01002
]
CO731_03328 (dacF_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amih01011
]
CO731_03328 (dacF_2)
Enzymes [BR:
amih01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CO731_03328 (dacF_2)
Peptidases and inhibitors [BR:
amih01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CO731_03328 (dacF_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
amih01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CO731_03328 (dacF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Motif
Other DBs
NCBI-ProteinID:
AWC23855
LinkDB
All DBs
Position
complement(3358882..3360369)
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AA seq
495 aa
AA seq
DB search
MRQALPGKVKKTAISLKSFVVFTIAAAIGLSSVAPASAAKDSRYAAIVIDANTGETLHSS
SADSRRYPASLTKMMTLYLTFEALSKGRIKKDSKVVFSKNAAAEPPTKIGVKAGGSITVE
AAILSLITRSANDASTALGEMIGGSEENFARMMTAKARSLGMKGTVFRNANGLPNTAQFT
TARDMAKLGIALREHYPQYYGYFSTRSFAFGRQRIANHNRLLGRVKGVDGIKTGYTRASG
FNLVSSVQDGNRSLVAVVLGGTSGASRDNKMAELIKTYMPQASRRGGGDLIAKTDTPMPE
VKTASVALPKRNVPTPDTRPMAEQVEVAEAISDNEMAVEEEVVAAAVPAPKPTIGLASKP
KIAMASAERFGANIPFQIRKPKDRAPAAEAVEQAYAEPAPAVAALDQMKTASIPSGWAIQ
VASSPSDGEARAILDKTAKRVPQVLADASAYTVPFEKGGVTYFRARFAGFESKDSAWNAC
NALKKKKIACYAVAQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcaagcgttgccaggcaaagtcaaaaagacggccatctccttaaaatcattcgtg
gttttcaccatcgcggcggccatcggcctgagttcggtggcgccagcctccgctgcaaaa
gacagtcgctacgcggcgatcgtcatcgatgcgaacaccggcgagacgctccactcgtcg
agcgcggattcgcgccgttatcctgcgtcgctgaccaagatgatgacgctctacctgacc
ttcgaggccctttcgaaaggccgtatcaagaaggacagcaaggtcgtgttctcgaagaac
gccgcagccgagccgccgaccaagatcggcgtcaaggcaggcggttccattaccgtcgaa
gcggccatactgtcgctgatcacgcgctcggccaatgacgcctcgaccgcgcttggcgag
atgatcggcggctccgaggagaatttcgcgcggatgatgaccgccaaggcacgcagcctc
ggcatgaagggcaccgttttccgcaacgccaacggcctgccaaacaccgcgcagttcacc
accgcgcgcgacatggccaagctcggcatcgcgctgcgtgagcattatccgcagtactac
ggctacttctccacccgcagcttcgccttcggtcgccagcgcattgccaaccacaatcgg
cttctcggccgcgtgaagggcgtcgatggcatcaagacaggctacacccgcgcgtccggc
ttcaacctcgtttcgtcggtccaggacggcaatcgcagcctggtggccgtggttctcggc
ggcaccagcggtgccagccgcgacaacaagatggcggaactgatcaagacctacatgccg
caggcctccaggcgcggcggtggcgacctgatcgccaagaccgacactccgatgccggaa
gtgaaaacggccagtgtcgcattgcccaagcgcaacgtaccgacgcccgatacccgtccc
atggccgaacaggtcgaagtcgcggaagccatctccgacaatgaaatggcagtcgaggaa
gaagtcgtggcagccgcggtgcctgcccccaagccgaccatcgggctcgccagcaagccc
aagatcgccatggcctcggccgagcgcttcggcgccaacattcccttccagatccgcaag
ccgaaggaccgcgccccggcggcggaagctgtcgagcaggcctatgccgagccggcccct
gccgtggcggcactggaccagatgaagaccgcgtcgattccatccggctgggccatccag
gttgcctcctcgccgagcgacggcgaagcgcgcgcaatcctcgacaagaccgccaagcgg
gtgccgcaggttctcgccgacgcatccgcctataccgtgcccttcgaaaagggcggcgtg
acctacttccgtgcccgctttgccggcttcgaatccaaggattccgcctggaacgcctgc
aacgcgctgaagaagaagaagatcgcctgctacgccgtcgcgcagtag
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