Aminobacter sp. MSH1: CO731_03878
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Entry
CO731_03878 CDS
T05420
Symbol
csd_1
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
amih
Aminobacter sp. MSH1
Pathway
amih00450
Selenocompound metabolism
amih01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CO731_03878 (csd_1)
Enzymes [BR:
amih01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
CO731_03878 (csd_1)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
CO731_03878 (csd_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
AWC24393
UniProt:
A0A2S0XMV1
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All DBs
Position
complement(3922855..3924114)
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AA seq
419 aa
AA seq
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MEREDAMDKKVEDSTYDVEAIRRDFPILSREVYGKPLVYLDNGASAQKPQVVIDTIANAY
SNEYANVHRGLHFLSNAATDAYEKARESVRRFLNAPNVDQIVFTSNATSAINTVAYGYGM
PNIGEGDEIVLSIMEHHSNIVPWHFIRERQGAKLVWVPVDDLGAFHIEEFEKRLTDRTKL
IAVTHMSNALGTVTPIKEICRIAHARGIPVLVDGSQSAVHMPVDVQDLDCDFFVMTGHKL
YGPSGIGVLYGKREMLERMRPFQGGGEMIVEVTEDIVTYNEPPHRFEAGTPPIVQAIGLG
AALDYMDSIGRERIAAHETMLRDYAHERLRAINSLRIFGDAPGKGAIVSFELQGIHAHDV
SMVIDRQGVAVRAGTHCAQPLLKRFGVTSTCRASFAMYNTKAEIDVLAEALEKARKFFG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttggaaagagaagacgcgatggacaagaaagtcgaagacagcacctacgacgtcgaggcg
atccgccgcgatttcccgatcctgtcgcgcgaggtctacggcaagccgctcgtctatctc
gacaacggcgcctcggcccagaagccgcaggtggtgatcgacaccatcgccaacgcctat
tccaacgaatacgccaacgtccaccgcggcctgcatttcctgtccaatgccgcgaccgac
gcctacgaaaaggcgcgcgagagcgttcgccgcttcctcaacgcgccgaacgtcgaccag
atcgtcttcacctccaatgccacctcggcgatcaacaccgtcgcctatggctacggcatg
cccaatatcggcgaaggcgacgagatcgtgctgtcgatcatggagcaccactccaacatc
gtgccgtggcatttcatccgcgaacgccagggcgccaagctggtctgggtgccggtcgac
gatctcggcgccttccacatcgaggaattcgaaaagcgcctgaccgaccgcaccaagctg
atcgccgtcacgcacatgtcgaatgcgctcggcaccgtgacgccgatcaaggagatctgc
cgcattgcgcacgcgcgcggcatccccgtgctggtcgacggcagccagagcgcggtgcac
atgccggtcgacgtccaggatctcgactgcgacttcttcgtcatgaccggccacaagctc
tacggtccctcaggcatcggtgtcctctacggtaagcgcgagatgctcgagcgcatgcgt
cccttccagggcggcggcgaaatgatcgtcgaggtcaccgaagacatcgtcacctacaac
gagccgccgcaccgcttcgaggccggcacgccgccgatcgtccaggccatcggcctgggc
gctgcgctcgactacatggacagtatcggccgcgagcgcatcgcggcgcatgaaacgatg
ctgcgcgactacgcccatgagcggctgcgcgccatcaattcgctgcgcatcttcggcgat
gcgcccggcaagggcgccatcgtctccttcgagctgcagggcatccacgcccacgacgtg
tcgatggtcatcgaccgccagggcgtcgccgtgcgtgccggcacgcactgcgcccagccg
ctgttgaaacgcttcggcgtaacctccacatgcagggcgtccttcgccatgtacaatacg
aaggccgagatcgacgtcctggccgaagcgcttgaaaaagcgcgtaaattcttcgggtga
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