Aminobacter sp. MSH1: CO731_03916
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Entry
CO731_03916 CDS
T05420
Symbol
ddpA_7
Name
(GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
amih
Aminobacter sp. MSH1
Pathway
amih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CO731_03916 (ddpA_7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amih02000
]
CO731_03916 (ddpA_7)
Transporters [BR:
amih02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CO731_03916 (ddpA_7)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AWC24429
UniProt:
A0A2S0XN08
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All DBs
Position
3963556..3965148
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AA seq
530 aa
AA seq
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MKLFKAALLAAALAMPMTPAISLAATPADILVVAQNIDDIVSIDPAEAYEFSSGEYVAQT
YDRLVQYDAADTKTLAAGLAKEWAADDASKTITFTLRDGVKFTSGNPLRAEDVVYSWKRV
IVLNKAPAFILTQLGWTPENFDSMVKADGNKVVVKYEGDFASAFVLNVLAARPASVVDAV
TLQANETNGDMGNGWLKSNSAGSGPFVLKTFRPGELINLTANAEYFNGAPAIKGVIIRHV
AEAATQQLLLESGDVDMAKNLTSDQIATIAGKDTLITETYPQAAVHFLSFNQKDEALQPE
AVWDAARYLVNYKGMTDTFLKGQMQTHQAFWPSGFPGSLDETPYTYDPAKAKQILADAGI
KTPITVTLDVINSTPFTDMAQSLQASFAEAGINFEIIPGTGSQVITKYRARTHEAMLLYW
GPDFMDPHSNAKAFAYNEDNSDDHYQSTTTWRNGWAVPEELNKATKAALAEPDQAKRSAM
YVDLQKKVQEKSPIVIMFQAATQVARAKNVEGYVNGATSDFVYYRLVKKN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgttcaaagccgcgctgcttgcggcggcgctggccatgccgatgacgccggcg
atcagcctggccgctacgccggccgacattctcgtggtggcgcagaacatcgacgacatc
gtcagcatcgacccggcagaggcctacgagttctcgtcgggcgaatatgtcgcccagacc
tatgaccgtctcgtccagtacgacgccgccgacaccaagacgctggccgccggcctcgcc
aaggaatgggcagccgacgacgcctccaagaccatcaccttcacgctgcgcgacggcgtc
aagttcacctccggcaatcccctgcgcgccgaagacgtggtctactcgtggaagcgcgtc
atcgtgctcaacaaggcgcccgccttcatcctgacccagctcggctggacgccggaaaac
ttcgattccatggtcaaggccgacggcaacaaggtcgtggtcaagtatgagggcgatttc
gcatcggccttcgtgctcaacgttctcgcggcccgccccgcttcggtggtcgacgcggtc
acgctgcaggccaacgagaccaatggcgacatgggcaatggctggctgaagtcgaattcg
gcaggatctggcccatttgtactgaagaccttccgtccgggcgaactgatcaacctgacg
gccaatgccgagtatttcaacggcgcacccgcgatcaagggcgtcatcatccgccacgtc
gccgaagcggcgacccagcagctgctgctggaatcgggtgacgtagacatggccaagaac
ctgacgtcggaccagatcgcgacgatcgccggcaaggatacgctgatcaccgagacgtat
ccgcaggcggccgtgcacttcctgtcgttcaaccagaaggacgaggccctgcagccggaa
gccgtgtgggatgccgcgcgctacctggtcaactacaaaggcatgaccgataccttcctg
aagggccagatgcagacccaccaggccttctggccctcgggcttccccggctcgctcgac
gagacgccctacacctacgatccggccaaagccaagcagatcctggccgatgccggcatc
aagacgccgatcaccgtcacgctcgacgtcatcaactcgacgccgttcaccgacatggcg
cagtcgctgcaggcaagcttcgcggaagccggcatcaacttcgagatcatcccgggcacc
ggctcgcaggtgatcaccaagtaccgcgcccgcacccacgaggcgatgctgctgtactgg
gggcctgacttcatggacccgcactccaacgccaaggcgttcgcctacaacgaggacaac
tcggacgaccactatcagtcgaccaccacgtggcggaacggctgggctgtgccggaagag
ctgaacaaggcgaccaaggcagcactcgccgagcctgaccaggccaagcgcagcgcgatg
tatgtcgacctgcagaagaaagtgcaggagaagtcgccgatcgtcatcatgttccaggcg
gcgacccaagtggcgcgtgcgaagaacgtcgaaggctacgtcaacggcgcaacctccgac
ttcgtctactaccgcctcgtcaagaagaactga
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