Aminobacter sp. MSH1: CO731_03919
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Entry
CO731_03919 CDS
T05420
Symbol
hupB
Name
(GenBank) DNA-binding protein HRm
KO
K03530
DNA-binding protein HU-beta
Organism
amih
Aminobacter sp. MSH1
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amih03032
]
CO731_03919 (hupB)
03036 Chromosome and associated proteins [BR:
amih03036
]
CO731_03919 (hupB)
03400 DNA repair and recombination proteins [BR:
amih03400
]
CO731_03919 (hupB)
DNA replication proteins [BR:
amih03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CO731_03919 (hupB)
Chromosome and associated proteins [BR:
amih03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CO731_03919 (hupB)
DNA repair and recombination proteins [BR:
amih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CO731_03919 (hupB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AWC24432
UniProt:
A0A2S0XMY5
LinkDB
All DBs
Position
complement(3966978..3967250)
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AA seq
90 aa
AA seq
DB search
MNKNELVSAVAEAAKLSKGDAQSAVDAVFSVITGELKGGGDVRLVGFGNFTVSKRAESTG
RNPQTGAEVKIPARTVPKFSAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgaactagtgtccgccgtcgctgaggctgccaagctgtccaagggcgat
gcgcagtccgccgttgatgcagtgttctccgtcatcaccggcgaactgaagggtggcggc
gatgtccggcttgtcggtttcggaaatttcaccgtgtcaaaacgtgcggagtccaccggc
cgcaacccgcagaccggcgcggaagtgaagatcccggcccgtacggtgccgaagttctcg
gctggcaaaggcctcaaggacgcggtcaactga
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