KEGG   Aminobacter sp. MSH1: CO731_03969
Entry
CO731_03969       CDS       T05420                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
amih  Aminobacter sp. MSH1
Pathway
amih00740  Riboflavin metabolism
amih01100  Metabolic pathways
amih01110  Biosynthesis of secondary metabolites
amih01240  Biosynthesis of cofactors
amih02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:amih00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CO731_03969 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CO731_03969 (ribD)
Enzymes [BR:amih01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CO731_03969 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CO731_03969 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AWC24481
LinkDB
Position
complement(4012589..4013716)
AA seq 375 aa
MARDMSASEQDRIDRRYIAAALRLSRKNLGLTSTNPAVGTLIVRDGGNGPVIVGRGVTAI
GGRPHAEAEALAEAGDLARGATAYVTLEPCAHHGRTPPCANALVNAGITRVVGAASDPDP
RVSGRGYAILRGAGIEVKEGVLAREAADQLAGYMNRSLRKRPEVILKLALSADGMIGRRG
QGQIEITGQVARRQVHVMRAEIDAILVGIGTALADDPELTVRLPGLRNRSPARIVLDRLA
RLPATSKLARSAHDVPVFVAACPEGDPKNRAELERAGVKFLATETYDGRVALPELLEDLA
NQGMSRIIVEGGADTARAFLDEGLVDRIALFSGPEAIGADGIAAPIGRDHIPAGFSLVRE
ARFGEDTFAEWIREI
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggccagggacatgagtgcatccgagcaggacaggatcgaccgccgctacatcgcggcc
gctctcaggctttcgcggaagaatctcggcctgacctcgaccaatccggcagtaggcacg
ctcattgtccgcgacggcggcaacggaccggttatcgtcgggcgcggcgtcactgccatc
ggcggccgtccgcacgccgaggccgaagctctggccgaagccggcgaccttgcgcggggc
gccaccgcctatgtcacgctcgaaccgtgtgctcatcacggccgcacgccgccctgtgcc
aatgcgctcgtcaacgccggcataacccgtgttgtcggcgctgccagcgaccccgatccg
cgcgtatcgggcaggggatacgccattcttcgcggcgccggtatcgaggtcaaggaaggc
gtgcttgcccgcgaggccgccgatcagcttgccggatacatgaatcggtccttgaggaag
cgccctgaagtgattctgaaacttgcgctttccgccgatggcatgatcggcaggcgcggc
cagggacagatcgagatcaccgggcaggtcgcccgccgccaggtccacgtcatgcgcgcc
gaaatcgatgccatcctggtcggcatcggcaccgcacttgccgacgatcccgaattgacc
gtgcgtttgcccgggctccgcaaccgttcgccggcacgcatcgtgctcgacaggctcgcg
cggttgccggcgacgtcgaagctggcgcgatcggcgcatgatgtgccggtgtttgtcgct
gcgtgcccggaaggcgatccgaagaaccgggccgaactcgagcgcgcgggcgtgaaattc
ctggcgacagagacctatgacggccgcgtggcacttcccgaactgcttgaggatctcgcc
aatcaaggcatgtcgcggatcatcgtcgaaggcggagccgacaccgcacgggccttcctc
gacgaaggtctggtcgaccggatcgcgctgttttccggtccggaggcgatcggggcggat
ggtattgcggcccccatcggtcgcgaccatataccggcagggttcagccttgtgcgcgaa
gctcgcttcggcgaggacaccttcgccgaatggataagggaaatctga

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