KEGG   Aminobacter sp. MSH1: CO731_03986
Entry
CO731_03986       CDS       T05420                                 
Symbol
rnd_2
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
amih  Aminobacter sp. MSH1
Brite
KEGG Orthology (KO) [BR:amih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amih03016]
    CO731_03986 (rnd_2)
Enzymes [BR:amih01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CO731_03986 (rnd_2)
Transfer RNA biogenesis [BR:amih03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CO731_03986 (rnd_2)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AWC24498
UniProt: A0A2S0XN75
LinkDB
Position
4032312..4033469
AA seq 385 aa
MHVITTQDELDTAVAALEKSNFVTVDTEFIRETTFWPELCLIQMAAPGVSALVDPLAPGL
DLKPFFDLMANEAVTKVFHAARQDIEIVFHLGGLIPHPVFDTQVAAMVCGFGDSVSYEQI
VQKITGGRIDKSSRFTDWRHRPLSEKQLEYALADVTHLIDVYQHLVTELEREGRAHWLNE
EMEVLTSRATYDPHPEDAWKRLKMRLRKPQELAIVQAVAAWREREARERNVPRGRVLKDD
AIYEIAQQAPRDTTALSRLRTTPKGWERSSSATALLGVVNAALEIPRDQMPKLPKTFQPP
EGSSAAAELLKVLLRLVSEKEGVAPKVLASGDDIDRIAAEGEAADVPALQGWRRSVFGET
ALRLVRGEIAIRFDKRKIAVFEIEA
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgcatgtaataacgacccaggacgaactcgataccgccgttgccgctctcgaaaaatcc
aacttcgtcacggtcgacaccgagttcattcgcgaaaccactttctggcccgagctctgc
ctgatccagatggcggcgcctggcgtttcggcgctggtcgatccactggcgcccgggctc
gacctcaagccgttcttcgacctgatggccaacgaagcggtgaccaaggtcttccatgcc
gcgcggcaggacatcgaaatcgtcttccatcttggcgggctgatccctcatcctgttttc
gacacgcaggtggcggccatggtctgcggcttcggcgacagcgtctcctacgagcagatc
gtccagaagatcaccggcggccgcatcgacaagtcatcgcgcttcaccgactggcgccac
aggccgctgtcggaaaagcagctcgaatatgcgctggccgacgtcacccacctgatcgat
gtctaccagcatctcgtcaccgagctcgagcgcgaaggccgcgcgcactggctgaacgaa
gagatggaagtgctgacctcgcgggcaacctacgatccgcatccggaagacgcctggaag
cggctgaagatgcgcctgcgcaagccgcaggaactggccatcgtgcaggccgtcgccgcc
tggcgcgagcgcgaggcgcgcgaacgcaacgtgccgcgcgggcgcgtgctcaaggacgac
gcgatctacgagatcgcccagcaggcgccgcgcgacaccacggcgctgtcgcggctgcgg
accacgcccaagggctgggagcgctcctcttcggcaaccgccctgctcggcgtcgtcaat
gcggcgctcgaaataccgcgcgaccagatgcccaagctgcccaagaccttccagccacct
gagggctcgagcgcggccgccgaactgctcaaggtgctgctgcgcctggtctcggaaaaa
gaaggggtggcgcccaaggtgcttgcttcgggcgacgacatcgaccgtatcgccgccgaa
ggcgaagccgccgacgtccctgccctccagggctggcgccgctcggtgttcggcgaaacg
gcactaagactcgtgcgaggcgaaatcgccatccgtttcgacaagcgcaagatcgcagtg
ttcgagattgaagcctga

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