Aminobacter sp. MSH1: CO731_04648
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Entry
CO731_04648 CDS
T05420
Name
(GenBank) DNA topoisomerase type I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amih
Aminobacter sp. MSH1
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amih03032
]
CO731_04648
03400 DNA repair and recombination proteins [BR:
amih03400
]
CO731_04648
Enzymes [BR:
amih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CO731_04648
DNA replication proteins [BR:
amih03032
]
Prokaryotic type
DNA Topoisomerases
CO731_04648
DNA repair and recombination proteins [BR:
amih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CO731_04648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AWC25154
UniProt:
A0A2S0XQ15
LinkDB
All DBs
Position
complement(4720931..4721947)
Genome browser
AA seq
338 aa
AA seq
DB search
MAGVSSSPARLRYVNDEEPGISRRPAGKGFSYRCADGRTAGRADLERIRGLAIPPAWTDV
WICADALGHIQATGRDQRGRKQYRYHPRWTERRDEAKFSRLGDFARTLPRLRRKVNADLG
KRKLSREKVVAAIVWLLDNTMIRVGSPQYARENGSFGLTTLRGRHVDVSGSTLRFAFKGK
SGKQWRLQLVDRRMAGLVRRIQELPGQHLFQYIDDNGERSRVTSDDVNDYIRAACGPDFS
SKDFRTWGGTVRALALFGDLELPDGLPARQRLCNQVIDEVASRLGNTRTVCRKGYIHPAI
LERWSDGELWTRLHGSRRTRSTWLDVDEARTLAWLSAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggcgtttcctcaagccctgcgcgtctgcgctatgtcaacgacgaggagcccggt
atctcgcggcgcccggccggcaagggcttctcatatcgctgcgctgacggacggactgcg
ggtcgggccgatctggagcgaattcgcggcctggccatccctcctgcgtggactgacgtt
tggatctgtgccgatgcattgggccatatccaggcaaccggtcgggaccagcgcggacgc
aagcagtaccgctaccatccgcgctggactgagcgccgcgatgaggcaaagttctcgagg
ctcggcgattttgcccggacacttccccggctgaggcgcaaagtgaatgcggacctgggc
aaacgaaagctgtcgcgggaaaaggttgtcgccgccatcgtctggctcctggacaacacc
atgatccgggtcgggagtcctcaatatgctcgggaaaatggcagtttcggcctgaccacc
ttgcgcggccgtcatgtcgacgtcagcggatcgaccctgcgctttgccttcaaaggcaaa
tccggcaagcaatggcggttgcaactcgttgaccgccggatggccgggctggtccgacga
atacaggaattgcccgggcagcacctgttccaatacatcgatgacaacggcgaacgatca
cgcgtgacctccgacgacgtgaacgactacatccgcgctgcgtgcggcccggatttcagt
tccaaggatttcaggacctggggtggaacggtgcgtgcgctggcgctgttcggcgatctc
gagcttcctgacggcctgccagccaggcaacgcctgtgcaatcaggtcatcgatgaagtc
gcaagcaggctcggcaatacccgcacggtttgccggaaagggtatattcatcccgcaatt
ctagagcggtggtcggacggggagctttggacgcgacttcacgggtctcgaagaacgcgc
agtacgtggctcgatgtcgatgaagccagaacgctcgcctggctttcggccttttag
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