Aminobacter sp. MSH1: CO731_05220
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Entry
CO731_05220 CDS
T05420
Symbol
dapE_4
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
amih
Aminobacter sp. MSH1
Pathway
amih00300
Lysine biosynthesis
amih01100
Metabolic pathways
amih01120
Microbial metabolism in diverse environments
amih01230
Biosynthesis of amino acids
Module
amih_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CO731_05220 (dapE_4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amih01002
]
CO731_05220 (dapE_4)
Enzymes [BR:
amih01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CO731_05220 (dapE_4)
Peptidases and inhibitors [BR:
amih01002
]
Metallo peptidases
Family M20
CO731_05220 (dapE_4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
DUF4625
Motif
Other DBs
NCBI-ProteinID:
AWC25719
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Position
5249256..5250479
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AA seq
407 aa
AA seq
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MTGPGDSIIAVAMKLPTDPAENLAALIRCPSVTPAEGGALTALEAMLKPLGFAVDRPTFS
ETGTPDIENLYARRSGNGPHLMFAGHTDVVPVGDEAAWTHPPFSAAIANGEMYGRGAVDM
KGGIACFVAAVARHVEANGGPKGSVSLLITGDEEGPAINGTVKLLEWAAARGEKWDASLV
GEPTNPDMLGDMIKIGRRGSVSGVVTVNGRQGHAAYPHLADNPVRGLMTLVDALLNPAFD
KGTRDFQPSNLEVTTFDVGNPATNVIPAKATAAFNIRFNDTWTVETLQAEIHNRLDKASG
RKKYRKGRKEPIEFELTWRDTPSHVFLTRDDKLVDALAGSIKAVTGRKPKLSTTGGTSDA
RFIKDYCPVVEFGLVGKTMHMVDERVPLAELEMLTQVYQRFLEDWFG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgacagggccgggcgattcaattatcgctgtggccatgaaactgcctacagatcccgcc
gagaaccttgccgccctcattcgctgcccgtcggtcaccccggctgaaggcggcgccctg
acggcgctggaagccatgctgaagccgctcggcttcgccgtcgaccgccccaccttctcc
gagacgggcacacccgacatcgagaacctctatgcccgccggtccggcaacggaccgcac
ctgatgttcgccggccacaccgacgtcgtgccggtcggcgacgaggcggcgtggacgcac
ccgccgttctcggcagccatcgccaatggcgaaatgtatggccgcggtgccgtcgacatg
aagggtggcatcgcctgcttcgtggcggcggtggcgcgccatgtcgaggccaatggcggc
ccgaaaggatcggtatcgctgctgatcaccggcgacgaggaaggccccgcgatcaacggc
accgtcaagctgctcgaatgggcagccgcacgcggcgagaagtgggacgcttcgctggtc
ggcgagccgaccaacccggatatgctgggcgacatgatcaagatcggccggcgtggctcg
gtgtcgggcgtcgtcaccgtcaacggacgccagggccatgccgcctatccgcacctcgcc
gacaatccggtgcgcgggctgatgacgctggtcgacgcgctgctcaaccctgccttcgac
aagggcaccagggatttccagccgagcaacctcgaggtcaccaccttcgacgtcggcaat
ccggccaccaacgtcattccggccaaggcgacggcagccttcaacatccgcttcaacgac
acctggacggtggagacgctgcaggcggagatccacaatcgcctggacaaggcgagcggc
cggaagaaataccgcaagggccgcaaggagccgatcgaattcgagctgacctggcgcgac
acgccgagccatgtctttttgacccgcgacgacaagctggtcgacgctctggcgggctcg
atcaaggctgtcaccggccgcaagccgaaactgtcgaccaccggcggcacgtcggatgcg
cgattcatcaaggattattgcccggtcgtcgaattcgggctggtgggcaaaaccatgcac
atggtcgatgagcgcgtgccgcttgccgaactcgaaatgctgacacaggtctaccagcgc
ttcctggaagactggttcggatga
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