Aminobacter sp. MSH1: CO731_05278
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Entry
CO731_05278 CDS
T05420
Symbol
potD_6
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein precursor
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
amih
Aminobacter sp. MSH1
Pathway
amih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CO731_05278 (potD_6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amih02000
]
CO731_05278 (potD_6)
Transporters [BR:
amih02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CO731_05278 (potD_6)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AWC25777
LinkDB
All DBs
Position
pAM01:complement(4019..5053)
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AA seq
344 aa
AA seq
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MKLTRRKFAVGMTAAIASMSLPRLASAQSSLVVPTYGGLWAKFWEENLLPGLTSATGIQP
QLDVGLGKDFVAKIRAGGDRSPYSIFMGNENIAAVLRAEGFFEPFDLAKVPNAAKTFPQF
INKDAKGIRAIVSPIGLAYRTDLVKTAPTSWHDLWENPEFKGKTGLYQIGNTGAVLFLRL
VAELFGSGPDDFDTAFTKIKELLPFTQASWSGEVATALIRGDAIIAPVDWTEIMTLQDKG
APVAIVAPKEGVLAFEQSFNLVATGAEKDAAHAYLNYILDAKVQQDMAKAFYTSPSNSES
VVDDALKARTPIVGPRMAEIKSYDWDSYVDKAAEIADRWNREMA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacaaggcgtaaattcgccgtcggtatgacggcagctattgcctcgatgagc
ctgccgcggctggcctccgcgcaatcgtcactggtcgttccgacctatggcggtctgtgg
gccaagttctgggaagagaacctcttgccgggcctcacctctgccaccggcatccagccg
cagctcgacgtcgggcttggcaaggacttcgttgccaagatccgcgccggcggcgaccgt
tcgccctacagcatcttcatgggcaacgagaacatcgcagccgtgctgcgcgccgagggc
ttcttcgagcccttcgacctcgccaaggtgccgaacgcggccaagaccttcccgcagttc
atcaacaaggacgccaagggcatccgcgccatcgtttcgccgatcggcctagcctaccgc
accgacctggtgaagaccgcgccgacctcgtggcacgacctctgggaaaacccggagttc
aagggcaagaccggcctctaccagatcggcaataccggcgccgtgctgttcctgcgcctg
gtcgccgaactgttcggcagcgggcccgacgacttcgacaccgccttcaccaagatcaag
gaactgctgccgttcacgcaggcttcgtggagcggcgaggtggcaacggccctgatccgc
ggcgacgcgatcatcgcgccggtcgactggaccgagatcatgacgctgcaggacaagggc
gcaccggtggcgatcgtcgcacccaaggaaggcgtgctcgccttcgagcagtcgttcaac
ctggtcgccaccggcgccgagaaggacgccgcgcacgcctacctgaactacatcctcgac
gccaaggtccagcaggacatggccaaggccttctacacctcgcccagcaacagcgagtcc
gtcgtcgacgacgcgctgaaggcacgcacgccgatcgtcggcccgcgcatggccgagatc
aagagctatgactgggacagctacgtcgacaaggcggcggagatcgccgaccgctggaac
cgggagatggcgtaa
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