Aminipila luticellarii: EQM06_01105
Help
Entry
EQM06_01105 CDS
T05806
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
amij
Aminipila luticellarii
Pathway
amij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQM06_01105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amij03021
]
EQM06_01105
03019 Messenger RNA biogenesis [BR:
amij03019
]
EQM06_01105
Transcription machinery [BR:
amij03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EQM06_01105
Messenger RNA biogenesis [BR:
amij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EQM06_01105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
S1CSD-TOTE-2
NACHT
AAA
OB_RNB
AAA_22
Mor
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QAT41935
UniProt:
A0A410PSQ5
LinkDB
All DBs
Position
247820..249193
Genome browser
AA seq
457 aa
AA seq
DB search
MEQNVLKNKKVSELREMAKSFSIEGYEKMKKAELLTALEAQETKPQEESPSGTSDSNTGR
KAEAQKETSQVPSPEERQHKEERPEVEGILELADGGFGFLRFSNFLTSDKDIYVSPSQIR
RFNLKTGDKIKGISRKPNEGERFGALLYVLTVNGDEPGVAMRRPDFDDLTPIFPKERLSL
ETGIRNDTAMRLIDLVAPIGKGQRGIIVAPPKAGKTILLKKIANTIETKYPEIEMIVLLV
DERPEEVTDMKRSLTSGEVIYSTFDEMPQHHVKVAEMVLARAQRLAEHGKDVVILLDSIT
RLARAYNLVVPASGRTLSGGLDPGALHKPKKFFGAARKLEEGGSITILATALVETGSRMD
DVIFEEFKGTGNMELHLDRKLSEKRIFPAINLNKSGTRREDLLMTPEEVEAVWMMRRAMA
NLGTQEVTETIIDNLAHTRNNADFIQVIKKSKLAEQK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaatgttttaaaaaataaaaaagtttcagagcttagggaaatggcgaaaagt
ttttctattgaaggctatgaaaaaatgaaaaaagcggagcttctgactgcgcttgaggca
caggaaaccaaaccgcaggaggagagtccttccggcacgtccgattccaataccggaaga
aaggcagaggcgcagaaagaaacttctcaggtgccgtccccggaggaaagacagcacaaa
gaagaaagaccggaagtagagggcatcctcgagctggcggacggaggcttcggattcctg
agattctccaattttttgaccagcgataaagacatctatgtctccccgtcgcaaatcaga
aggttcaatttaaagacgggagataaaataaagggcatctccagaaaaccaaatgaggga
gaacgctttggcgcattgctttatgtacttaccgtaaatggagatgaaccgggcgttgcc
atgaggcggcctgattttgatgatctgacaccaatctttcccaaggagaggttatcttta
gagacaggcatcagaaatgatacggccatgaggcttatcgatctggtagcacctatagga
aaagggcagagaggtattattgtcgcacctcctaaagccggtaaaaccattcttctcaaa
aaaattgccaacaccattgaaacaaaatatccggagattgaaatgatcgttcttctggta
gatgaaagaccggaggaagtaaccgacatgaagcggtcgctgaccagcggagaagtcatt
tattccacctttgatgaaatgccgcagcaccacgtaaaggttgcggaaatggttttggcc
agagctcagagactggctgagcacggcaaggatgtggtgatccttttggacagcattaca
agattagcccgcgcctacaatttagtagtaccggcttcgggcagaacgctgtcgggagga
ttggatccgggagccctgcataagccaaagaaatttttcggtgcggcgcgaaagctggaa
gaaggaggaagcatcaccatattggccacagcccttgtagagaccggaagccgtatggac
gatgtgatttttgaggaatttaaaggaaccggtaacatggaacttcatctggacagaaag
ctgtccgaaaagagaatattccctgctattaatttaaataaatcgggaaccagacgagag
gatctgctgatgactccggaagaagtagaggctgtgtggatgatgagaagagccatggct
aatctggggactcaggaagtaacagaaacaattattgataatcttgctcacaccagaaac
aatgcagactttattcaggtcataaaaaagagcaagcttgcagagcaaaagtag
DBGET
integrated database retrieval system
