Aminipila luticellarii: EQM06_04025
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Entry
EQM06_04025 CDS
T05806
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
amij
Aminipila luticellarii
Pathway
amij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQM06_04025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amij03019
]
EQM06_04025
03009 Ribosome biogenesis [BR:
amij03009
]
EQM06_04025
Enzymes [BR:
amij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EQM06_04025
Messenger RNA biogenesis [BR:
amij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EQM06_04025
Ribosome biogenesis [BR:
amij03009
]
Prokaryotic type
rRNA helicases
EQM06_04025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
CMS1
AAA_30
Cas3-like_C_2
NAT10_TcmA_helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QAT42463
UniProt:
A0A410PU61
LinkDB
All DBs
Position
877550..879082
Genome browser
AA seq
510 aa
AA seq
DB search
MENLNFNELNLSDAMKKALDFMGFEEATPIQSKAIPVVMAGHDVIGQAQTGTGKTCAFGI
PAVEMIDTKHQGVQVLVLCPTRELAIQVSEEFRNLCKYKKGIKSLAIYGGQSIDRQIMAL
KGKPQIIIGTPGRIMDHMRRHTLKFQNLKMAVLDEADEMLNMGFREDIDTIFSQIPEERQ
TMLFSATMPKGILDIAELYMNHPEHVVTLQKEVTIDTIDQYYIEVRENSKLELLCRLIDS
KNIKLGIIFCNTKWKVDELCTSLQARGYSAEALHGDMKQRERDRVMNKFRKGQVELLIAT
DVAARGIDVNDVEAVFNYDIPTDTEYYVHRIGRTGRAGKKGVSYSFVFGRDIYKLKDIER
YTKSRISRTKPPTVSSIEAVRMQSATEEVMAALAAGGFSKYTEAIERILEESDDITTLDI
AAALFKMKFSELDSRSYEESELDNDFTLNKRDKFKDVVKYRGEGSHQKGRGGYGSDKNRG
RDRRRDSGRGKDGAGRDGRSRSQSRKKPNN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacttaaattttaatgagttaaatttatccgatgcaatgaaaaaagcattggat
tttatgggctttgaagaggcgactcccatccagtcaaaggccattccggtggtcatggca
ggacatgatgtgatcgggcaggcacagaccggtacggggaagacctgtgcgtttggaatc
cctgcggtagaaatgatcgatacgaaacatcagggcgtgcaggtgcttgttctatgcccc
accagagaacttgccattcaggtatccgaagagttcagaaacctttgtaaatataaaaaa
ggaattaagtctttagctatttatggcggacagtccatcgacagacagattatggcgtta
aagggcaagccgcagattattataggcacacccggcaggattatggatcacatgcgaaga
cataccttgaaatttcagaatctgaagatggccgtactggacgaagcggatgaaatgctt
aatatgggatttcgggaggatatcgatacgattttttctcagattccggaagaaagacag
acgatgcttttttccgctaccatgccgaaggggattttggatattgccgaattatatatg
aatcatccggagcatgtggtaaccctacagaaagaggtcaccattgacaccatagaccaa
tattatattgaagtcagagaaaattccaagctggaattgctctgccgattgatcgactcc
aagaatatcaagcttggcattattttctgcaatacgaagtggaaggtagacgagctttgt
acctctctccaggctcgggggtattctgcggaagcactgcacggggatatgaaacagcgg
gaacgtgaccgcgtcatgaataaattcagaaaaggtcaggtagagctgctgattgctacg
gatgttgccgcaagaggaatcgatgtcaacgacgtagaagcggtatttaactatgatata
ccaacggataccgagtattatgttcaccggatcggacgaacgggcagagccggaaagaaa
ggggtttcgtattcctttgtgttcggcagggacatttataaattaaaagatattgaacga
tatacgaagtcgaggatttccagaaccaaacctcctacggtttccagcattgaagccgtg
aggatgcaatctgccacggaggaagtcatggcagcgcttgcggccggcggattttccaaa
tatacggaagccatcgaaaggattctggaggaatccgacgatatcaccacgctggatatt
gcagctgccctgtttaaaatgaagttcagcgagctggacagcagaagctacgaagagtcc
gagctggacaatgattttacactcaacaagagagacaaatttaaagatgtagtaaaatat
agaggagaaggaagccatcaaaagggcagaggcggatacggctcagataagaaccgcggc
agagacagaagacgcgattccggaagagggaaagacggagccggcagagacggaagaagc
cgatctcagagcagaaaaaagccaaacaattaa
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