Aminipila luticellarii: EQM06_05985
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Entry
EQM06_05985 CDS
T05806
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
amij
Aminipila luticellarii
Brite
KEGG Orthology (KO) [BR:
amij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amij03009
]
EQM06_05985 (rimO)
Enzymes [BR:
amij01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EQM06_05985 (rimO)
Ribosome biogenesis [BR:
amij03009
]
Prokaryotic type
ribosomal protein modification factors
EQM06_05985 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
QAT42817
UniProt:
A0A410PV43
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All DBs
Position
1317303..1318622
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AA seq
439 aa
AA seq
DB search
MNIYFETLGCPKNVNDSEMAAGILEERGHCIVDNPIDSDAIIVNTCGFINDAKKESINKI
LEMADLKEEESRKRLLIVSGCLSKRYGDELFKEMPEVDIFIGVNEYQELPDILEKHQAER
ELYIYDSNQKFQEVQNRKLAENPYTATIKIAEGCDNVCAYCIIPHIRGRYRSRKEEDILR
EAEMLAQKGCRELILIAQDVTAYGIDLYGEFRLAALVKKLCRIDGLQWIRLMYCYEDRIT
DELIQVMATEEKVCHYIDIPIQHSSDKILQLMNRRSTHESIVNKIQKLRNAMPDIHIRTT
LITGFPGETQTEFDELYEFVETTKFERLGVFAYSKEEGTPAADMKGQVRSDVKEKRKDAV
MRLQLEISLASNQKKIGQVLQVLVEEQDEEGAYIGRSQYDAPEIDNSVIFNSDKVLKPGD
MVQVQITDAFDYDLVGVEV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttattttgaaacattaggttgccctaaaaatgtcaatgattctgaaatggca
gcaggaatactggaagaaagaggacattgcatcgtagataatccgattgacagtgatgct
attatagtcaacacatgcggatttatcaatgatgcgaaaaaagaatccattaataagatc
ttggaaatggcagacttgaaagaagaagaaagcagaaagcgtctgctcattgtatccggc
tgtctgtccaagcgatatggagacgagctgtttaaagaaatgccggaggtcgatattttt
ataggggtcaacgaatatcaggagctgcctgatattttggaaaagcatcaggcggaacga
gaactgtacatttatgactccaatcagaaatttcaggaggtacagaacagaaagctggcg
gaaaatccctatacggcgacaataaaaattgccgagggctgcgataatgtatgcgcatac
tgcatcattcctcatattcggggacgttacaggagccgaaaggaagaagacatcctgcgg
gaagccgaaatgctggcacaaaagggatgcagggaactgatactgatcgctcaggatgta
actgcttacggaattgatctgtatggggagttcagattggccgctctggttaaaaagctg
tgcagaatcgacggattgcaatggatcaggctgatgtattgctatgaagaccggattacc
gatgagctgattcaggtcatggcaacggaggagaaggtctgtcattacattgacatacct
attcagcacagcagcgataaaattcttcagctgatgaacagacggtctacccatgaaagc
attgtaaataaaattcaaaagctcagaaatgccatgccggatattcacatacgaaccacg
ttgatcaccggatttccgggggaaactcaaacagagttcgatgaactgtatgaatttgta
gaaaccacaaaatttgaacggcttggtgtatttgcctattccaaagaagagggtacaccg
gcagcggatatgaaaggtcaggtccgttccgatgtgaaggagaaacgcaaggatgccgtc
atgagacttcaactggagatttctctggcttccaatcagaaaaaaattggacaggttctg
caggtacttgtagaagagcaggatgaggaaggcgcttacattggacgatctcagtatgat
gctcccgaaattgacaactcagtgatattcaattccgataaagttttaaaacccggagac
atggtgcaggttcagataacagatgcatttgattatgatttagtaggagtggaggtatag
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