KEGG   Acropora millepora: 114946973
Entry
114946973         CDS       T06134                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
amil  Acropora millepora
Pathway
amil03013  Nucleocytoplasmic transport
amil03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114946973
  09122 Translation
   03013 Nucleocytoplasmic transport
    114946973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amil03019]
    114946973
   03041 Spliceosome [BR:amil03041]
    114946973
Messenger RNA biogenesis [BR:amil03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     114946973
Spliceosome [BR:amil03041]
 Complex C
  Other components
   EJC/TREX
    114946973
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114946973
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_Vps41 eIF2A Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd DSE1_N WD40_RFWD3 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st NBCH_WD40 WD40_MABP1-WDR62_1st Tricorn_2nd Beta-prop_TEP1_C PD40 Beta-prop_EIPR1 TRM82_WD CFAP251_N Beta-prop_WDR75_1st PAC11 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_ELP1_1st DPPIV_N JLPA
Other DBs
NCBI-GeneID: 114946973
NCBI-ProteinID: XP_029179470
LinkDB
Position
1
AA seq 321 aa
MAPGDYLNEMKRYFENNSRTKDFIAHTAKVHSVAWSCDGRRLASGSFDRTVSIFVLEKDR
LTKETNHKGHGESVDQLCWHPSSSNFLVTASGDKTIRIWDARASKCVSVVNTKGENINIC
WSPDGNTIAVGNKEDLITFIDARTYKARCDEQFKYEVNEISWNNTNDLFFLTNGHGCINI
LSYPDLKLQQTLHAHPANCICIKFDPKGRYFATGSADALVSLWDLDELVCVRTFSRLDWP
VRTLSFSHDGEMLASGSEDLIIDIAMVETGERICEVQCNAPTFTVAWHPSKPLLAFACDD
KDKHDRDAGTVRLFGFGTNSS
NT seq 966 nt   +upstreamnt  +downstreamnt
atggcgccgggagactatctgaacgagatgaaacggtattttgaaaacaactcaagaacg
aaagactttatcgcccacacagccaaggttcattctgtagcttggagttgtgacggcaga
agactcgcttcaggctcatttgacagaactgttagcatttttgtgttggagaaggaccgt
ttaactaaagaaacaaatcacaaaggccatggagagagtgttgatcaactttgctggcat
ccaagtagctctaattttctagtgacggcatctggtgataaaacaatcagaatatgggat
gccagagccagcaagtgtgtatctgttgtaaatactaaaggagaaaacataaatatttgt
tggagccctgatggtaatacaatagcagttgggaacaaggaagatctaataacatttata
gatgcaagaacttataaagcaagatgtgatgaacaattcaaatacgaagtgaatgaaatc
tcttggaataacacaaatgacttattttttctaaccaatggacatgggtgtattaacata
ttaagttatcctgatttaaagctccaacagacattacacgctcatcctgccaactgcatt
tgtataaagtttgatcccaaaggaaggtattttgcaactgggagtgctgatgcattggtt
agtctatgggacttagatgagctggtttgtgtcagaacattttcaagacttgactggcca
gtacgaacactaagctttagtcatgatggtgagatgctagcatctggctctgaggatctt
atcattgatattgccatggtagaaactggcgagagaatatgtgaggtacagtgcaatgcc
ccaacgttcacagtagcttggcatccttcaaagcctctgttagctttcgcttgtgatgat
aaggataaacatgatcgagatgccggcacagttcgtctctttggcttcgggaccaactcc
tcctga

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