Acropora millepora: 114950928
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Entry
114950928 CDS
T06134
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
amil
Acropora millepora
Pathway
amil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114950928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114950928
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114950928
mRNA cycle factors
Common to processing body (P body) and stress granule
114950928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
114950928
NCBI-ProteinID:
XP_029182934
LinkDB
All DBs
Position
1:2967185..2982069
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AA seq
731 aa
AA seq
DB search
MAPILGSVPQVLRQAETLKAALKSSDDDFTVGSEGWQSRQRLQDLYKSILLTDLESGLDK
KVEQDLWNSAFKSQIDFLRQQAKERKGSKKAEVQAVLTLFLEASSGFYIQLLQELCLTYR
LDIPGHIRSSQLGILEEINGNTCVTKKPHTQSCYYICQDCLVHLGDIARYCDDPEQAEMF
YRHALVLVPSNGQPYNQLAILASGKGDELATVYYYCRSIAVKNPFPAASTNLHKTLNKVV
ARHNTRDVTSNISKAELCHIFLQFHGHIYLVQDLEQAKSLKDHFLISLKDTLKKNKFTSE
FLIKLVSITLFVLWNIKTGGADELEEFECIGKDEEECLKLTLGFAVEFFDVLVLHTSENG
PANEQTDVLPALTLLCQWLASASPNTWNADILKKPKIWEDFAALLNLLQVTYPHLPEKTD
LPLHEDWELQCFLPLRISQRKLTYSMKRTRPDDEAAHRVSKLVRFGNRLVSSNPCILSKV
EDLATGLSQFSLKVNTSSPIEEISAQEDKFPKAPQDIDLESAGQKLLASLSTLNKATPVG
TPFAETSSLFKGSSDVGQSTAGYVPPSPSTVAQYSLFQSGWNVPLTSAARTQQDQPSGRA
VAKPPNQHRVIAGDPLTGSGSSAVFPASLPSPPTAENRRPTSFGTSFPPAGMPANYSSPS
QSPFGGFGFSGGWVGSGVWAPNGASGGGGTSPVGAHSLQSIWGSDFTPPSEGMSPLQQLL
QEQKKHQQKDT
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgatccttgggtcggtgccgcaagttttacggcaagcagagactttgaaagcc
gctttgaaaagtagtgacgatgatttcactgttggaagtgaaggatggcagtccagacaa
aggttacaagatctgtacaagagcatcctcttaactgacctagaatcagggttggacaag
aaagttgagcaagatctctggaacagtgccttcaaaagtcaaatagactttttgagacaa
caagctaaggaaaggaagggaagtaaaaaagctgaagtacaagcagtcttgactttattt
cttgaagcctccagtggtttctacatccagcttttgcaggagttgtgcctgacgtacagg
ttagatataccaggccacattcgatcatcacaattaggcattctggaagagatcaatggt
aatacttgtgtcacaaagaaacctcacacacagtcatgttattacatctgtcaagactgt
ttggtgcatttgggtgacatagctcgatactgcgatgatcccgaacaggctgaaatgttt
tatcgtcatgctcttgtgttggttccttcaaatggtcagccatacaaccaactagccatt
ttagcaagtggtaaaggagatgaactggcaacagtgtactattattgcaggagcattgct
gtcaagaacccattcccagcagcatcaacaaatctccacaaaacattgaataaggttgtt
gcaaggcataacacaagagatgttacttcaaacatatccaaggcagaattatgccacatc
ttcctacaatttcatggtcatatttatctggttcaagatcttgaacaggcaaagagtctc
aaagatcacttccttatctcactgaaagacacactgaagaagaacaaattcacctctgaa
tttcttatcaaactggtgtccatcaccttgtttgtgttgtggaacataaaaacagggggt
gcagatgaactggaagagtttgaatgcattggcaaggatgaagaggaatgtttgaagcta
actctgggctttgcagtggaattttttgatgttcttgtacttcataccagtgaaaatggg
cctgcaaatgagcagacggatgtgttaccagctctcactttgctttgccagtggctggca
tctgcatcccctaacacgtggaatgcagacattctcaagaaaccaaagatttgggaagat
tttgctgctttactgaatcttttacaggtgacctaccctcacttacctgagaaaacagat
cttcctttgcatgaagactgggaactgcagtgttttcttcctcttaggataagtcaaagg
aaactaacctacagtatgaaaagaaccagaccagatgatgaagctgctcacagagttagt
aaacttgtcaggtttggaaatcgcttggtgtccagcaatccttgcatcttatccaaagtt
gaagatctagccactggattgtctcagttttcgttaaaggttaacacttcatcgccgatt
gaagagatttcagcccaagaggacaagtttccaaaggctccacaagacattgatttagaa
tcagccggacaaaagctgttggcttccctgtccactttgaacaaggcaacaccagtggga
acgccttttgcggagacaagctcgctgtttaaaggttcatcagatgtcggacagtccacg
gcgggatatgttccaccctccccatccacggtagctcagtattcgcttttccagtcggga
tggaatgtacctcttacctcagcagcccgtacacaacaagaccaaccatccgggagagct
gtcgcgaagccgccaaatcagcacagggtcattgcaggggaccccttgacgggatccggg
agtagcgctgtattcccagcctccctcccatctcccccaactgcagaaaaccgcagacct
accagctttgggacgagttttcctccagcgggaatgccggccaactactcgtcaccgtcc
caatctccgtttggtggttttgggttcagtggtggctgggttggctcgggagtctgggct
ccaaacggtgctagtggaggcggagggacaagtccggtaggggcgcatagtttgcagtct
atctggggctcagacttcactcctccgtctgaaggcatgtcaccgctacagcagctactg
caggagcaaaagaaacatcaacagaaggacacgtga
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