Acropora millepora: 114953231
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Entry
114953231 CDS
T06134
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
amil
Acropora millepora
Pathway
amil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114953231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114953231
03012 Translation factors [BR:
amil03012
]
114953231
Enzymes [BR:
amil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114953231
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114953231
Translation factors [BR:
amil03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114953231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
Helicase_C
ATPase
NACHT
AAA_19
Zot
PhoH
Motif
Other DBs
NCBI-GeneID:
114953231
NCBI-ProteinID:
XP_044182618
LinkDB
All DBs
Position
10:15971582..16011023
Genome browser
AA seq
1076 aa
AA seq
DB search
MQRNLRACFRSIGIVIRTCNFSDRKDFVAVHFGKMHKGGVRNKADFSDGRGRRRGKGRHP
SGLSGNEIGMWYAAKANRKRKERDLKQRAYVTMDNQHEERINELLGAIRSGESNVDYGNA
NSKSQDELSQGYDAHVSDSSSQDWCDSSGQSSSLSFEGTSSDVMAKGGASKARGGTENPW
QCLDKEDEMEADEAGTSTMRSDVFENELSIGGGASDDSSRAATFTKRSLHQDSVLDKTFK
EEQQQKLTSKGTRYAAMQEFRRKLPAYDMREELLKLIKSEQVLVISGETGCGKTTQVAQF
ILDDAIEQGCGSTCRVICTQPRRISAISVAERVAAERGESCGGNSSVGFQIRLESKLPRE
QGSILYCTTGILLRWLVSDPLLLGTSHIILDEIHERDVLSDFLLIIVRDLLPKRPDMKLV
LMSATLNSEMFSSYFGNCKMAHIPGFTYPVQEFYLEEIIEKTGYHVDQDRNQRAQRPEPK
WKKYRDRGTKSLAKDNWIAKSQQEDKEMMWKHHLDSIQHKFSPRTIATLNNMYMEKIDLD
LVVRVVTHISLHMEEGAILVFLPGWDDISKVHDKLKEEKMFSSDKFRIIPLHSMMPSTNQ
KEVFDRPPEGVRKIVIATNIAETSITIDDVVFVVDGGKVKEKTYDVQNKIACLQPVWISK
ASSRQRRGRAGRVQPGYCFHLFTKYHADALEDYQLPEMLRTPLEELCLQIKILKLGMIRP
FLTKALQPPEDQAVINALEVLHQLNALDANEELTPLGYHLATLPVDPRVGKIILFGAIFS
CLDPVLTVASVLGFKDPFVSPLGKQKEAERARSYFAGDTRSDHLALLRAFQGWEQASRGG
REREFCWRNFLSGNTMKMIKDMKQQFSSLLRDIGFLDSSDPKATSANHNSENLKLVKAIL
CAGLYPNVAKIEHHRTFKRPPILRTFEDGRVYLHPKSVNAQVIVFDDNFLIYHEKMKSSS
LFLYDSTMIAPFPLLFFGGDITVFKEEGQETVAVDDFIKFKSPTRIANLVKELRVELDKL
LKQKIAQPKMKLSAGTGVGSKENALLRAIIDLITSEENSNWRKQRAMADYPQVMTH
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgaaacctacgagcgtgttttcgctcaataggtatcgtaattagaacgtgcaat
ttttcggatcgaaaagactttgtggctgtgcattttggtaaaatgcacaaaggaggtgtt
cgcaacaaggcagatttttcagatggaagaggaaggaggcgtggtaaaggcagacacccg
tctgggttatcagggaacgagattggcatgtggtacgctgccaaagcaaacaggaaaaga
aaggaaagagacctgaagcagcgagcttatgttaccatggacaaccaacatgaagaaaga
attaatgaactactgggtgcaataagatctggtgaaagtaatgtggattatggcaatgca
aattcaaagtcacaagatgaattaagccaaggttacgatgcccatgtctctgactcttcc
tcccaagactggtgtgactcatctggacaaagttcctctctaagctttgaaggaacctcc
agtgatgtcatggcaaaaggaggtgcatcaaaagccagaggtgggacagaaaacccatgg
cagtgcttagataaagaagatgaaatggaagctgatgaggctggtacatccacaatgagg
tctgatgtatttgaaaatgaattaagtattggagggggggcatctgatgatagctctagg
gctgcaacattcacaaagagatctttgcatcaagattctgttttggacaagactttcaag
gaagaacaacaacagaaactcacttcaaagggaacaagatatgcagctatgcaggagttt
cgaagaaagctgccagcttatgacatgagagaggaattactgaaactcataaaatctgaa
caggtgttggtcatcagtggggaaacaggctgtggaaaaaccactcaggttgcacagttt
attttggatgatgcaattgaacaaggttgtggatcaacatgtcgtgttatctgcacacaa
ccaagaagaataagtgcaatttcagtagcggagagagttgctgctgaacgtggcgaaagt
tgtggtggaaatagcagtgttggttttcagatcagactggaaagtaaattacccagagag
caagggtctattctgtactgtaccacgggtatcctccttcgatggcttgtctctgaccca
ttacttttgggcaccagtcacatcattcttgacgaaattcatgaacgagatgttttgtca
gatttcttgctcatcattgtcagagatcttttaccgaaaagacctgacatgaaacttgtc
ctgatgagcgcaacattgaattcagaaatgttttcatcttactttgggaactgtaaaatg
gctcatattcctggcttcacgtatcctgtacaagaattctatcttgaggaaattattgaa
aaaacaggttatcatgttgatcaagacagaaaccaaagggctcagagacctgagcctaaa
tggaaaaagtatagggacagaggaacaaaaagccttgcaaaagataactggattgccaaa
agccaacaggaagacaaagagatgatgtggaaacatcacttagattccatccaacataaa
ttttcacccagaacaattgcaacactgaacaacatgtacatggagaagattgaccttgat
cttgttgtccgtgttgtcactcatatctcacttcatatggaggaaggagccatacttgtt
ttcctgcctggatgggatgatattagcaaagttcatgacaaattgaaggaagaaaaaatg
ttctcttcagataaatttaggatcattcctttacattccatgatgccatcaacaaaccag
aaagaggtgtttgatcgtcctccagaaggtgtaagaaagattgtcatagctaccaatatt
gcagaaaccagcattactattgatgatgtcgtctttgttgtggatggtggcaaagtgaaa
gaaaagacttacgatgtacaaaacaaaatcgcgtgtttgcaaccagtgtggataagcaag
gcttcctcacggcaaaggcgaggccgtgctggaagggttcaacctggctactgcttccat
ttgttcactaagtaccatgccgatgcgctggaggattaccagctaccagagatgctacgc
actcctctggaagaactttgtcttcaaataaagattttgaagcttggtatgatcagacct
ttcctaacaaaagcactccagccgccagaagatcaagccgtgatcaatgctttggaagtt
cttcaccaactgaatgcattggatgcgaatgaagagttgacgcctcttggttatcatcta
gctacgctacctgttgacccacgagtcggcaaaatcattttgtttggtgcgatattttcc
tgtttggacccggtgctgacagtagcttctgttttaggcttcaaggatccttttgtttcg
ccattgggtaaacagaaggaagcagagagggcccgctcgtattttgctggagatacacga
agcgatcatctagctttattgagagctttccagggatgggaacaagcatcaagaggggga
cgtgaaagggagttctgctggagaaatttcctctctggaaacactatgaagatgatcaaa
gacatgaagcagcagttttcgtcacttcttcgtgatatcggtttccttgactcctcggat
ccaaaagctacatctgcaaatcacaattcagagaatttaaagctcgtcaaagctatccta
tgcgcaggtctgtaccctaatgtggcgaaaatcgaacaccatcgtacatttaaaaggcct
ccaatacttcgaacctttgaagacggccgagtatacctccacccgaagtcagtgaatgcc
caggtcatagtttttgacgacaacttcttgatttatcacgaaaaaatgaagtcttcctcg
ttgtttctgtatgacagtactatgatagcgccttttccgttgctgttctttggtggcgat
ataactgtgtttaaggaagagggccaagaaactgtcgcagtcgatgatttcatcaaattc
aaatctcccaccagaatcgctaatttagttaaggagctgcgtgttgaacttgacaaatta
ctaaaacagaaaatagcacagccaaagatgaagctaagcgctggcactggagtgggaagc
aaagaaaatgctcttttgcgagctatcatcgacttgataaccagcgaggaaaactcaaac
tggaggaaacaaagagcaatggccgattatccacaagtgatgacgcattag
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