Acropora millepora: 114953663
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Entry
114953663 CDS
T06134
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amil03041
]
114953663
Enzymes [BR:
amil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114953663
Spliceosome [BR:
amil03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
114953663
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
114953663
NCBI-ProteinID:
XP_029185815
LinkDB
All DBs
Position
10:complement(3363739..3394953)
Genome browser
AA seq
972 aa
AA seq
DB search
MPRIRMAHKFTERQRTGDVLTDEFVDFKSLLLSSDVLKGLSSSGFERPSPIQLKAIPLGR
CGLDLIAQAKSGTGKTCVFTVIALESLSLDQNTTQVLILAPTREIAVQIKDVISAVGSQM
NELVCHAFIGGLPVEEDKKLLKKACHIVVGTPGRIKSLIEGGFLKTDSVRLFILDEADKL
LEDNFQEQINWIFSSLPPNKQVMAFSATYPEYLAKHLTLYMREPTFVRLNANDPTLQGIK
QFYQVVSFHPLPHKTFEEKILRLLKLLSSVSFNQCLVFSNYQIRAQSLCNTLHLKGWPSV
FIAGSQSQSQRLKAIEKLKEFKCRVLISTDLTSRGIDAEHVNLVVNMDVPRDHETYLHRI
GRAGRFGTQGMGVTFVAKGEEEKLFKKMEETIGVTIDALPDPIPQFLCTNETSKGLSSKS
LQPCLATVDIDIMKKSSTKKSDDLVKLDSLQPNTMQNPARCSDEFGCNTDNNKIGMEQER
CVLETAGDIKNKSEVCLKQNEMAPEFGKCDTDKNSTSKTENVEQATSDVQQKVQAGCLSS
LLESSTCENCYGAEQVENSQSTQTVTQNNSGGRVDDDEEEDDSDNGNSDDGEGIPCYKTV
NGTCAVKIERKQVSPHNADEKLHSSLAGEIMDADFCTKLQGLNFESCPEIETLCAGCKPH
LAPGGDNESHGSQTKHAGNNKLPPLSVEGKELSKTFSTNERLKDVNLELEVTSEELSDEY
DITHDSKFDTATGGNSHLPSVEEFERYFEKYLENGPSFEQHNAHSSDSLTSGMDSDTEDD
IGTHSSSDSDDEGESNSIDEILVEHFHSVPWNYVSKSISPYEFPKSSNSGLHIGPKGLET
LTERPSEVPQRLDSLQGSYNENAENSIFENHPSCVICCDKSCECQLKQCWPDHFSTTNFN
WHETSSNDWLYNGTRQLPPSSQQFFHQPYDQDGQWNLSWYNAYHRQVDYIKQFVSLSRGC
ARVQVKERTHWA
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaatccgcatggctcacaagttcactgagcggcagcgcactggtgatgtgtta
acagatgaatttgtggatttcaaatctcttctactttcctctgatgttttgaaaggactt
agttcttctggatttgagagaccttcgccaattcagctcaaagctattccattaggaaga
tgtggactggacctgattgctcaagccaaatctggcactggaaaaacttgtgtttttact
gtgattgccttggagagcctttcactagaccagaacacaactcaggtcctgattttggca
ccaactagagagattgcggttcagatcaaagatgtcatatctgcagttggctcacagatg
aatgaacttgtttgccatgcatttattgggggattacctgttgaagaggataagaaactg
ttaaagaaggcgtgtcatattgttgtgggaacaccaggaagaattaagtctctgattgaa
ggtggcttcctgaagacagattctgtgcgactgttcattttggatgaagccgacaaactg
cttgaggataatttccaggagcaaatcaattggatattctcatcattgccgccaaacaag
caggtgatggcattctctgccacctacccagagtaccttgcaaaacacctaacactgtac
atgagggagccaacctttgtcagacttaatgcgaatgaccctacccttcagggtatcaag
cagttttatcaggttgtatcttttcatccattgccccacaaaaccttcgaggagaagatt
ttaaggcttttgaagcttttatcaagtgtatcattcaatcagtgcctcgtgttctcaaac
taccaaatcagggcacagagtctttgcaatactcttcatttgaaggggtggccatctgtc
ttcattgcaggcagccaaagtcagtcacagagactcaaagccatagaaaagttgaaagag
ttcaagtgccgagtgcttatttcaactgatctaacatcacgtggtattgatgctgaacat
gtcaatctggttgttaacatggatgtgccacgggaccatgaaacgtatcttcacagaatt
ggtcgggctggtcgatttggtacacaaggtatgggtgtgacctttgttgccaaaggagaa
gaagaaaagttatttaagaaaatggaggagactattggtgtaacgattgatgcacttcca
gatcccattccacagttcttatgtactaatgaaacatcaaagggtctttcctcgaaatca
ttgcaaccatgtctagccacagtggacattgatataatgaagaagtcaagcacaaaaaaa
tcagatgacttggtaaaacttgacagccttcaaccaaatacaatgcaaaatcctgcaagg
tgttctgatgaatttggttgcaataccgataataataagattggaatggaacaagaaaga
tgtgtcttggagaccgccggagatatcaaaaacaaatctgaggtctgcctcaagcaaaat
gaaatggcacctgaatttggcaagtgtgacactgataaaaattccacctcaaaaactgaa
aatgtggaacaagcgacatcggatgtccagcaaaaagttcaagctggatgtctttcctca
ttactggaaagttctacctgtgagaactgttatggtgctgaacaggttgaaaatagtcag
agcacccaaactgtgacccaaaataatagtggcgggagagttgatgatgatgaggaggaa
gatgacagtgataatggcaatagtgatgatggagaaggaattccttgttataagaccgta
aatggtacttgtgctgtcaaaattgagaggaaacaggtgtctccacataacgcagatgag
aaattgcactcctccttggctggagaaataatggatgcagacttttgcactaaattgcaa
ggcttgaattttgagtcttgtccagaaattgagaccttgtgtgcaggatgtaagcctcat
ttggctcctggtggtgacaatgaaagccatggttctcaaacgaagcacgctggcaacaat
aaactgcctccactgtcagtagaagggaaggaattgtctaaaacattctcaacaaatgag
aggttgaaagacgtgaatcttgaactcgaggtcacttcagaagagttaagtgatgagtac
gatataacgcatgattctaagttcgacacagcaactggtgggaacagtcacttgccctcg
gtggaagaatttgaaaggtattttgaaaagtatttggaaaatggtcccagttttgagcaa
cacaatgcacactcttctgattcattaacaagtggcatggacagtgatactgaagatgac
attggtacacattctagctctgattctgatgatgaaggggagagcaatagtattgatgag
atcctagtagaacatttccattctgtaccttggaactatgtgtcaaagagtatctcccct
tatgaatttccaaaaagtagcaattctggtcttcacattgggccgaaggggttggaaaca
ttaacagaaagacctagcgaggttccacagcgccttgattctttgcagggctcatacaat
gaaaatgctgaaaatagtatatttgagaatcacccttcttgtgtcatttgctgtgacaaa
tcatgtgaatgtcaacttaagcaatgttggccagaccatttcagtaccactaatttcaac
tggcatgaaacctcttcaaatgattggctgtacaatggaacgagacagttgccaccaagc
agtcagcaattctttcaccagccatatgatcaggacggccaatggaatttgagctggtac
aatgcttatcacagacaagttgattacataaagcaattcgtatcacttagtagaggttgt
gctcgtgttcaggtcaaggaaagaacccattgggcatga
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