Acropora millepora: 114954372
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Entry
114954372 CDS
T06134
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
amil
Acropora millepora
Pathway
amil04382
Cornified envelope formation
amil04512
ECM-receptor interaction
amil04518
Integrin signaling
amil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114954372
04518 Integrin signaling
114954372
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114954372
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114954372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amil04147
]
114954372
00536 Glycosaminoglycan binding proteins [BR:
amil00536
]
114954372
Exosome [BR:
amil04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114954372
Glycosaminoglycan binding proteins [BR:
amil00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114954372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
VWA
VWA_2
Copine
Motif
Other DBs
NCBI-GeneID:
114954372
NCBI-ProteinID:
XP_044180776
LinkDB
All DBs
Position
8
Genome browser
AA seq
1969 aa
AA seq
DB search
MRLRTASLLVLLLQVYRTVNSQNQNDAECNCKPGQKGARGRPGPVGNQGVQGTEGPPGRD
GLRGFKGYKGNAGVPGGVGPRGDKGLVGVPGFPGLYGIPGFPGIAGPKGFMGLCGCDGEK
GEPGFSGPSGTMGVAGDPGQKGQPGPKGDPYDGPRNATKGAQGDNGTKGEMGPKGPVGPV
GGTGIKGNTGEEGSAGPRGEQGPKGEQGDQAKGNATLLKGQKGEMGSPGEPGEPGEVELI
GPRAEALKGPKGENGSAGEVGIKGLKGDNSSVPGQRGNRGPQGNKGNSGFPGMKGEMGIK
GEAGSGGEPGFKGEPGIAGDRGEAGPAGPMGLKGEDGNNGARGPLGDKGIGIPGERGGKG
QKGNAGPAGNRGRKGDNGDAGPPGDVGHSVFGPEGDMGAAGPEGEKGPPGNPGFVGMTGP
MGPAGEEGPSGEKGEKGEQGEEKPGEQGMDGPKGVKGFQGVIGERGLPGAKAMPIFCPET
GCPPGRPGRPGPQGDPGLQGPQGNRGKKGQKGEKDECPKCAPGPKGMKGNQGIPGTPGSN
GTAGPNGTRGAQGSTGNSGSPGTDGEPGKKGAKGVQGPRGPDGEKGERPIAPRVELYEPP
GPKGDQGENGTKGLPGPQGTNGTRGEDGPPGEQGPNGTQGERGVNGSAGPPGIKGPDGDE
GETGMKGEPAVIEPIPAMELKGRNGSKGHTGMRGDEGAKGVKGQKGDGPSLAVLAELKGA
VGEVGQLDGPKGEKGDRGVNGSRGDTGAEGRQGLEGTPGRDLQGPAGMIGEEGAIGVNGS
RGQVGDTGDQGSEGPQGPPGEAGAPGDVGEPGESIPGPNGTNGEDGLKGSKGMKGDLGDN
GNSGANGTKGDRGPQGPKGAQGGNGTVGSTEGAAGAKGDRGEKGPSGESIVGPPGDPGLM
GQFGVPTQGEPGEPGPRGIAGVDGVAGSKGLPGPRGDEGRRGPPGSPGPQGQKGNIGDIL
CGQLNADYAFLVDTSGSILEEEYRILQRFVTQVIDFLLIGENLTHVGLIEYSSGASLQFN
FIQSFDKQEIKKSVENVRQTGGLTRIDLALKIASQQLFTQEGGMRSSSRKVMVVLTDGNQ
TGTNRAPNQTPLVDAVRPIKDMGIKVIAIGIGSVDRDQLATLVSDPDDILQTSSFEELLT
LVQTTVGRSCRGPPGEKGFEGPKGYTGEGGEKGLVGLPGEMGDQGPAGSQGPTGSPGDKG
GVGNKGERGQQGPPGKATPGSKGPKGERGDRGLRGEPGLNGLKGLAGQQGDQGAVGGRGS
KGNDGVQGETGAEGEPGANGDKGIVGPPGLEGMVGMTGADGPQGPTGEKGVVGFPGTKGQ
QGDGGDVGVDLRGEEGDPGEKGQPGMGGLKGFTGLSGDAGLRGPPGNTTPGEPGDPGAPG
IKGAKGEAGPSQLEGIAIEAGPQGDPGRPGKIGMPGLEGDPGDVGEVGEAGAKGPAGGPG
QIGEDGFQGIQGIPGEEGEKGLRGPEGQKGDKGQEGEKGLQGARGNDGTLGPKGRNGSTG
LPGNVGADGLPGERGPIGPKGQKGFAGVDGLDGLPGRNGEKGIKGFKGSSGEDGPQGEVG
GQGEMGAVGDTGDKGEPGDPGIEGFDGIPGETGSRGNNGSNGLPGLPGEPGRPGTKGGRG
NDTVDEGQKGEVGDPGFPGAYGIKGPLGEQGPRGPPGLVQGPKGDEGQPGFPSIAKGQKG
SRGLIGTMGSKGFPGQRGEPGPPGPNGIVGRAATGEGFHVVVHSQAMSIPDCPLNLTRLW
TGYSLLYVQGHDNSHGQDLGASGSCMRRFTTMPYLFCNMNDQCHYASRNDYSYWLTTNIS
MPMMPVSASAVEPYVSRCAVCETPGPAIATHSQSTEIPNCPAGWQSIWTGYSFLMHTGAG
GSGTGQALSSPGSCLRDFRHNPFFECHGRGTCHYFTNKYSFWLSTVKEMFTPKQVSETLK
PGNLLSRVSRCSVCYRMVQKKKRKRHTFPRDVPQLNSRTMQQHMAQRNT
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgaggctaaggacggcctcactactcgtcctacttttgcaagtctacagaacagtcaat
tcccagaatcaaaatgatgctgaatgcaactgtaaacctggacaaaaaggtgcaagggga
agaccaggtccagtgggaaaccagggagtacaaggtacagagggccctcctggaagagat
ggcttgagaggcttcaagggatacaagggaaatgctggagtgcctggtggtgtcggtcca
cgaggagataagggattagttggcgttcctggattcccaggtctttatggaataccaggc
tttccaggtattgctgggccaaaaggttttatgggactttgtggttgtgatggtgaaaag
ggagagcctggctttagtggcccatcaggcacaatgggtgttgctggtgatcctgggcag
aaaggccaaccaggtccaaagggtgatccatatgatggtccacgtaatgcaacaaaaggt
gctcagggtgataatggaacaaaaggagaaatgggaccaaagggcccagtcggacctgtt
ggtgggactggcatcaaaggaaatactggagaagaaggatcagctggacccagaggtgaa
caaggccctaaaggagagcagggtgatcaagcaaaggggaatgctaccttattgaaagga
cagaaaggcgagatgggtagcccaggtgagccgggtgaaccaggagaagtagaacttatt
ggccccagagcagaggctttgaaaggaccaaagggtgagaatggatctgctggtgaggta
ggaatcaaaggactgaagggtgataattcatctgtgcctggccaaagaggtaaccgaggg
ccacaaggaaataaaggaaattcaggttttcctggtatgaagggtgaaatggggataaaa
ggagaggctggatctggtggagaacctggctttaagggtgaaccaggtatagcaggcgac
cgaggtgaagctggtccagccggcccaatgggattgaaaggtgaagatggaaacaacggt
gcaagaggtcctctaggagacaaagggattggaatacctggggaacgaggtggcaaagga
caaaaaggcaatgcagggccagctggaaacagagggagaaagggggataatggtgatgca
ggacctcctggtgatgtgggacattctgtctttgggccggagggagatatgggtgctgct
gggccagaaggtgaaaaaggaccccctggcaatccagggtttgtaggtatgacaggccct
atgggaccagctggagaagaaggacctagtggggagaaaggagagaaaggggagcagggt
gaggaaaagcctggagagcaaggaatggatggacccaaaggagtaaaaggattccaagga
gtaataggagagcgtggtctaccgggtgctaaagcaatgccaatattttgtccagaaact
ggatgcccaccaggaagacctggccgccctggtccacagggagaccctggtctgcaaggt
ccacagggaaaccggggtaaaaaaggtcaaaaaggagagaaggatgagtgcccaaagtgt
gctcctgggccaaagggtatgaaaggaaatcaaggaattcctggaacacctggcagtaat
ggtacagcaggaccaaacggaacaaggggtgcccaaggttccactggtaattctggctca
cctggtactgatggcgaaccgggaaagaagggtgctaagggcgttcaggggcctcgtgga
cctgatggagagaaaggagaaagacctattgccccaagggtagaattgtatgaacctcct
ggtcccaaaggagaccaaggtgaaaatggcactaagggattgcctggcccacaaggtact
aatggcacccgtggagaagatggacctcctggggaacaaggtcctaatggcacccaagga
gaaaggggagtcaatggctcagctggtcccccaggaataaaagggcctgatggtgatgag
ggtgaaactggaatgaaaggtgaacctgcagtcatcgaacccatcccagcaatggaattg
aaaggccgaaatggaagcaagggtcatacagggatgagaggagacgagggggccaaagga
gttaaaggtcaaaaaggagatggtccttccctagcggtcctggcggagttaaagggggca
gttggtgaggttggacaacttgatggcccaaaaggggaaaagggggacagaggtgttaat
ggctcaaggggggacactggtgcagagggacgacaaggattggaaggaactccaggtcga
gatttacaaggacctgctggcatgattggtgaagaaggtgctattggtgtcaatggcagc
aggggccaggttggtgatactggcgatcaaggtagcgagggtcctcagggacctccagga
gaggcaggggctcctggagatgtgggagaacctggggaaagcatacctggtcctaatgga
acaaatggagaagatggtctcaaggggagtaaaggtatgaaaggagatctaggtgacaat
ggaaattcaggtgccaatggcaccaaaggagatagaggtccacaaggacctaaaggagcg
caaggtggaaatgggacagttgggtctactgaaggggctgcaggtgctaaaggggaccgt
ggagagaagggacccagtggtgaaagtatagtgggaccgccaggagatccggggttaatg
ggccagtttggtgtaccaacccaaggtgaacctggtgaaccaggccccaggggaattgct
ggagtggatggagttgctggcagtaaaggcttacctggccctcgaggagatgagggccga
cgagggccaccaggatcccctggacctcaaggacaaaagggaaatattggagacatcttg
tgtggccaactaaatgcggattatgcctttcttgtggacacctcgggaagcattcttgaa
gaggaatatcgtatcttgcagcgttttgtcactcaagtcatcgactttcttctaattggc
gaaaatttgacccatgttggtctgattgaatacagcagcggggcgagcttgcaatttaat
ttcatacaatccttcgacaagcaagaaatcaagaagtctgtggagaacgtacgtcaaaca
ggtggcttgacgcggattgatttagctctcaagattgcatcacaacagttatttacacaa
gaaggaggaatgagatcctcatctaggaaggtaatggtcgttttgactgacggcaaccaa
accggaacaaacagagcccctaatcagacccctctagtggacgctgttcggccaatcaag
gacatgggtattaaggtgattgcgattggcattgggagtgtggacagagatcaactggct
acgttagtctcagaccccgatgatattctacaaacaagctcttttgaagaacttctcact
ttggtgcagacaactgtcggcagaagctgtagaggtccgcctggtgaaaaaggctttgaa
ggtcctaaaggttacacaggtgaaggcggagaaaaaggtttagtgggtctgccgggagaa
atgggtgatcaaggacctgcgggatctcagggacccactggctctccaggagataaggga
ggagtcggtaataaaggagaaagaggccaacaaggaccaccgggaaaagcaacaccagga
tcgaaggggccaaaaggagaacgaggcgatcgcggacttaggggagaacctggtttaaac
ggtttgaaaggtcttgcgggacaacagggggatcaaggagcggttggtggacgggggagt
aaagggaatgatggtgtccaaggtgaaacaggagctgaaggagaacctggtgccaacgga
gataaaggtattgttggccctccaggacttgaaggaatggttggtatgactggagctgat
ggccctcaaggtcctactggtgaaaagggtgtagttggtttccctggaacgaaaggacag
caaggcgatggtggtgatgttggagttgacttacgcggagaggaaggagatccaggtgaa
aaaggacaaccaggaatgggcggcttaaaaggttttaccggattatctggagatgctggt
ttgcgtgggccgcctggaaacaccacccctggggaacctggagatccaggtgcccctgga
attaaaggagctaagggcgaagcaggcccttctcagttggaaggtatagcaattgaagca
ggccctcaaggagaccctgggcgacctggtaaaatcggtatgcctggactggaaggagat
cctggcgatgtaggagaagtgggagaggctggagccaagggacccgcaggaggaccaggt
caaatcggcgaagatggttttcaaggtatccagggaattccaggggaagaaggtgaaaaa
ggtttacgtggccccgaaggacagaaaggtgataaaggccaagagggtgaaaaaggactt
caaggagccagaggaaatgatggaacccttggtcccaaaggtcgtaacggtagcacaggt
ctccctggcaatgtgggtgcagatggccttcccggagaaagaggccccatcggaccaaaa
gggcaaaaaggtttcgctggagttgacggccttgatggacttcccggacgtaacggcgaa
aaaggaataaaaggattcaagggatcttcaggagaagatggaccacagggagaggtggga
ggtcaaggagaaatgggtgccgtgggagacactggcgataaaggagaacctggtgatcct
gggattgaaggtttcgatggtattcccggcgaaacgggttcgcgagggaataatggaagt
aatggtttacctggactacctggtgaacctgggcgtcctggtacaaaaggtggaagaggc
aacgatacagttgatgagggacaaaagggagaagtgggagacccaggattccccggcgcg
tatggaatcaagggaccattaggtgaacaaggccctcgaggtccacctgggcttgtgcag
ggtcccaagggagacgagggtcaaccaggttttccatccatcgccaaaggtcaaaaaggg
agtagaggtctcatagggacaatggggtcaaaaggctttccaggtcaaaggggagagcct
ggcccgccgggtcctaacggaattgttggaagagcggcgacaggcgaaggattccatgtg
gtggttcacagtcaggcgatgagtattccagattgtccgctcaacctcactcgactctgg
actggttacagtttgctgtatgttcagggacatgacaattcacatggacaggatcttggc
gcatcaggttcatgcatgaggcgtttcaccacaatgccctacctattctgcaatatgaat
gatcaatgccactacgcctccaggaacgactatagctattggctcaccaccaacatatcc
atgcccatgatgcctgtgagcgcttctgctgttgaaccttatgtcagccgatgtgccgtt
tgcgagactcctggacctgcgatagccactcacagtcagtcgacagaaatcccgaattgt
cccgcgggatggcaatcaatttggaccggatacagcttccttatgcacactggggccggt
ggaagtggtacaggccaggctctttcctctccgggctcgtgtcttcgcgattttcgccac
aatcctttcttcgagtgtcacggccgcgggacctgtcactatttcaccaataaatacagc
ttttggctctccacagtaaaggaaatgtttaccccaaaacaggtctcagagactcttaaa
cccggcaatctgctcagcagggtcagccggtgttccgtgtgctaccgaatggtacagaag
aagaagcgaaaacgccacactttcccaagggacgtgccacaacttaactctcgcactatg
caacagcacatggcacagaggaacacatag
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