Acropora millepora: 114954524
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Entry
114954524 CDS
T06134
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
amil
Acropora millepora
Pathway
amil04519
Cadherin signaling
amil04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
114954524
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114954524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amil03000
]
114954524
Transcription factors [BR:
amil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
114954524
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
114954524
NCBI-ProteinID:
XP_029186950
LinkDB
All DBs
Position
4
Genome browser
AA seq
904 aa
AA seq
DB search
MATNSEQQVNATLTDSLLMDVLNPGYLPDISALQVPTGSYQGPYLEILEQPKQRGFRFRY
PCEGPSHGGLPGEYSEKGKKSYPSVQLCNYKGPARIVVSLVTSDENPMPHAHSLIGKNAS
NGVVTVQIGPEQGMTASFPNLGIQHVTKKNVGYVLMDRYLKMQMLHTATLNALTTDPRVF
DIGAMVDEATADGDRGEFDKQIADTIAEEEASKVRSLVEKQKNSMNLSVVRLCFQAYLPD
DNGCFTKALPPCFSRSVYDSKAPSAANLKICRMDRNSGCVTGSDEVYLLCDKVQKDDIAV
VFYEIDENGKRSWEGQGLFAPTDVHRQVAIVFKTPAYWNIAVERPVKVHLELRRKSDDET
SDPVEFTYQPQMFDKEQIGSKRRKKIPHFSDYFKDGSGGGDPPAAGGGGGGGFSFNTLMF
PGLFSFQQNPGTSQSSYQGGAGTSQEGEANESGQRQDKELSLTELAWNVAAICAAAVRDY
AASGDMRYLLVVQRHLTAVQDDNGDTALHLAVINSQQEVIHCLVDVMAGLPESFVNEYNF
LRQTPLHLAVITKQPRALDCLIKAGANPRLRDRHGNTAVHIACSYGDATCLKALLHYDVS
KMVLNWQNYQGLTPVHLAVLCGSKDVLKLLRSAGANMSAQDGTSGKTPLHLSVEQDNLSL
SGFLILEANCDVDASTFDGNTPLHLAAGLGLKGHTALLVAAGADTTFPNSEDDTAFDLAN
VAEVQEILDEDEAPSADPVEELETGVISIRLGKGDLDRLDPYVRRKMAQRLDPSTGADWR
DLARRLGLGTLANAFAIQSSPTVQVLAHFEAADGTMEKLREVLYDMRRGDVLEILDQESR
HDSGFDSGFGSQSLSINRSEGDTSSGAHSSDVASRSSLSKDFHKLESSQESAKTRPPLQR
QHVF
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaactcagaacagcaggttaatgctactcttaccgatagtcttttgatggat
gtcttgaatccaggatatctccctgatatctcggcattgcaggtgcccactggcagttat
caaggcccttatttagaaattttggagcaacccaaacagagagggtttcgcttccgttac
ccatgtgagggtccttcccatggaggtttacctggagagtactctgaaaaaggcaaaaag
tcatacccgtctgtgcagctatgcaactataaagggcctgcacgcatcgtcgtatcacta
gttacttctgatgaaaatccaatgcctcatgctcatagtttgattggcaagaatgcatcc
aatggggttgttacagtacagattggacctgaacaggggatgacagcaagtttcccaaat
cttggtattcaacatgttacaaagaaaaatgtgggctacgtgttgatggacagatacctc
aaaatgcagatgttacacacagccactttgaatgcgctgacaactgatcctagagtcttt
gatattggggcaatggtagatgaagcaacagctgacggcgaccgaggagaatttgacaaa
cagattgcagacaccattgctgaggaagaagcatcaaaggttcgaagtttggtggagaaa
cagaaaaattccatgaatctaagtgttgtgcggctgtgctttcaagcctaccttccagat
gataatggctgttttacaaaagccctgcctccttgcttctctcgaagcgtgtatgactca
aaggcaccatcagctgcaaatttgaagatttgtcgtatggatcgcaattctggttgtgtg
acaggaagtgatgaagtttatcttctttgtgacaaggttcagaaagatgatatagctgtt
gtgttctacgagatagatgaaaatggcaagagaagttgggaaggccaagggctttttgcg
cccacagatgttcaccgtcaggttgccattgtgttcaaaacacctgcttactggaatatt
gctgttgagagaccagtcaaagtgcatctcgaattgaggcgaaagtctgatgacgaaaca
agtgaccctgtggaattcacataccaaccacaaatgtttgataaagagcaaattggttct
aaacgaagaaaaaagatccctcatttctcggattattttaaagatggcagcggtggtggg
gacccccctgcagcaggtggaggagggggaggagggtttagtttcaatactctcatgttt
ccaggattattttcctttcagcaaaacccaggcacatctcagtcctcttatcaaggaggt
gctggtacatctcaagagggcgaagccaatgaatctggacaaaggcaggacaaagagctg
tcgctaactgaattggcttggaatgttgcggcgatttgtgctgctgcggtacgggattat
gctgcctccggtgacatgagatacctccttgttgttcaacggcatctgacagcagttcaa
gatgacaatggagatacggcgcttcatcttgctgtcattaattcgcaacaagaggtcatc
cattgcctcgtcgatgtcatggctggtcttccagagtctttcgtcaatgaatataacttc
ttgagacaaacccccttacaccttgctgtcattacaaaacaaccacgtgctctggactgt
ctcataaaggccggtgcgaatcccaggttacgtgatcgccacggcaacaccgctgttcac
attgcttgcagctatggtgatgccacctgtcttaaagctctgttgcattacgatgtttca
aaaatggtgctgaactggcagaactaccaaggcctcacgccggttcatctagcggttttg
tgtggcagtaaagatgttctgaaacttttgcgttcggctggggctaacatgagcgctcag
gatggaacaagtggaaagactcctctccacctgtcagttgaacaagataatttatcgctt
tctggttttcttatcttggaggcaaactgtgatgtggatgcgagtacattcgatggcaat
acccctcttcaccttgctgctggactcggtctcaaaggacacacggcgcttctagtggct
gcaggagcagatacaacattccctaacagtgaagacgacactgcttttgacttggctaat
gtggctgaggtccaggaaattttggatgaggatgaagcaccgagtgctgaccccgttgaa
gagttagaaactggtgtgatcagtatcaggcttggtaaaggtgatctggaccgacttgat
ccatacgttcgaagaaaaatggcgcagaggctagatcccagtaccggagcagactggcgt
gatttagccaggagactggggctagggacacttgccaacgccttcgctatccagtccagt
ccaaccgtccaggtgttggctcattttgaggcagcggatggtaccatggagaaattgcgt
gaagtcttgtatgacatgcgcagaggcgatgtgttagaaatacttgaccaggaaagcaga
cacgactccggcttcgactcgggatttgggtctcaatctctctcgataaaccggtcagaa
ggtgacacatcgtccggggctcacagctctgatgtcgcatccaggtcttcgttaagcaaa
gatttccataaattggagtcttcgcaagagtctgcaaaaactcgcccaccactacaacga
cagcatgtgttttaa
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