Acropora millepora: 114954734
Help
Entry
114954734 CDS
T06134
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 homolog
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amil04040
]
114954734
Ion channels [BR:
amil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114954734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
DUF5674
Motif
Other DBs
NCBI-GeneID:
114954734
NCBI-ProteinID:
XP_029187210
LinkDB
All DBs
Position
6:9400028..9421508
Genome browser
AA seq
1250 aa
AA seq
DB search
MAGKKEGSASSILLTPLLGLKSRKSDRDSSSMATLHCPLPSVSYAPSRSNKNLLGLERES
VENVTVSLHQAARDGKCDLVERRLEKLGKGSKKINKRDEDNTSALHYAVRYNHFQIVKLL
LEFGADIEAKGEDDATPLHYAARFRPVPKAFGGSARPTPQVTPSPSSENLNDIGLIIKKD
QEKKKDGGLGGSLGKGSKSRLLAGAIGSKLFNKDPLNAEKRSSFLAVPKDQSSLPGETMI
LFLLSQKANVNACDNYGSTPLHYAVAKGNADAVSELLTHPGIDIEAKDKTQMTPLHVASS
QGSLSVAKCLIKAGANLRSLDEEQMTPLHFACMEGSLEVAKLLFETGEEQGGWSTVSKMV
TDQDREEQTPLHLAVEDGDIKLAKLCLDKGANVNAHKMNMSTPLHLAATGGDLEIVKMLL
EHDANIEAKNALQETPLHRAAHFNRVDIVDFLLSQGAYIECKDKDKETPLLIAASKNHME
TIKTLLAHGADIGAKDIDDATPIYRAASEGCMEALQFLLQDRKGKALVEEYDKYENTPLH
VAAKKGFVQIIQLLLDNGCCIDCKNDGSLTPLHMAAKFGRIRTVCALLKRDISIINDEDD
ASNTPLHLAALHGNDKVAKELLERGAAIDARNANLWTPLDCAAAKGWVEAASVLLDADCP
VDPTDKAKTTPLHLAAREGHVEMVKLLLSRKANITLTDSAGRNCLDMAIENNHKEVALVI
IQHDDWKQAMRNKTKEGNTINTPMRKLIKKLPEVAAKVFNRCVKTNGLPVDHPQYAFTLS
YEFLDDVSLEWAGFVTSQSADHEETGLDAVMYKIKSALPENASKQVEIKSNHPLMLMVTK
ERVKLLSHPLVTYLLRYKWSSFARYVYYGRLILYGIFLFFLTGYAMHTTKSISIAECKED
QCACNVTFQQGSVGSRVLWRQIGRPVILTTTSISIFLEVIQFCYVWRLYLKWNRLIELFA
YIISMVYIVNDFQHDEKSFKIGNGERCFVWHNSLGATAVYLSWIGLVLVMRKFPKLGIYV
VMFTDIFKTFAQFFVVCFLFIVAFGLGFHILLYDQVPYSTPGRALLKTTMGMLGEYEYDT
VYNDHVVPPVTWILYVAFLVTNCVIIMNLLVGLAVDDIKGVQEKAVLKRLAMQVDLALDV
EKALPAILRQRFATTQEVIYPNGSKYWTIWSFWNQGASPAHAFNEAMNPEKTPIEKLQNH
QEALKKEVMSVKSKLKAVFEHTTQLEAMMKALMKHHGISVEAEEEGEDDD
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaaaaaggaaggaagcgctagcagcattctcctcacaccattacttggatta
aagtcgagaaaaagcgacagagatagttcaagtatggcgactcttcattgtcctctcccc
tcagtgtcctatgctccctcaagatcaaataaaaatctgttgggattagaaagagagagc
gtcgagaatgtcactgtatccttgcatcaggcagctcgggatggaaaatgtgatcttgtg
gaaaggagactggagaaattgggtaaaggaagtaaaaagatcaacaagagagatgaagat
aatacatcagctttgcattatgcagtgcgctataaccactttcaaattgtcaagttgctt
ttggaatttggagcagatattgaggctaaaggagaagatgatgccacaccccttcactat
gccgccagattccgtcctgtgccaaaagcctttggtggctctgcacgaccgacacctcaa
gtcacacctagtcccagctcggagaacttgaatgatattggtttgattatcaagaaggat
caagaaaagaaaaaagatggaggattgggtggaagcttagggaagggatcaaagagtcgg
ctacttgctggtgcaataggaagtaaattattcaacaaagaccctttaaatgctgaaaag
aggagctccttcttagctgttcccaaagaccaatcctccttacctggagagactatgatt
ttgtttttgctgtcacaaaaagcaaatgtcaatgcctgtgacaactatggttccacgcca
ctgcattacgcagttgcaaaagggaacgctgatgctgttagtgaactcttaactcatcca
ggaattgatattgaggcaaaggataaaactcaaatgacacctttacatgtggcatctagt
caagggtctttgtctgtagcaaagtgtcttatcaaagcaggagcaaatctaagaagtctg
gacgaagagcaaatgacacctttgcattttgcttgcatggaaggaagtcttgaagttgcc
aaattactttttgaaacaggtgaagaacaaggcggctggtccacagtatccaagatggta
actgatcaagatcgtgaagagcaaactcctcttcatcttgcagttgaggatggtgatatt
aagctggcaaagctttgtcttgacaaaggcgccaacgtcaacgcacacaagatgaatatg
agcactccattgcacctggcagcaactggtggtgatttggaaattgtcaaaatgttgctt
gagcatgatgcaaacatagaagctaagaatgcattgcaggagaccccacttcacagagca
gctcattttaatagagtagatattgtggacttccttctgagtcagggtgcttacattgag
tgtaaagataaagacaaggaaacgccgttgttgatagcagcaagtaaaaatcatatggag
acaattaagacccttttggctcatggtgctgatattggtgctaaagacatagatgatgcc
acacccatataccgagctgcatcagaaggctgcatggaagctcttcagtttttgttgcaa
gatcgtaaaggcaaagcattggtcgaggaatatgacaaatatgaaaacacaccactgcat
gttgctgctaaaaaaggatttgttcaaattattcagctcctccttgataatggatgctgc
attgactgtaagaacgatggatcattgacacctctccacatggccgccaagtttggacgg
ataaggactgtgtgtgccctcctcaaaagagacatttcgattatcaatgatgaagatgat
gcatccaacacaccccttcatctagcagccttgcatggtaacgataaagtcgccaaggag
ctgctggaaagaggagcagctatcgatgccaggaatgccaatctatggacaccactggac
tgtgctgcagctaaaggttgggttgaagcagccagcgtcttgttagatgcagattgtcct
gtggaccccacagataaggccaagaccactccacttcatctggctgcgcgtgaagggcac
gtggagatggtgaaattactcctatccagaaaagctaacataactttgacagacagcgca
ggtcgtaactgcctggatatggcgatcgagaataatcataaggaagtggcgctagtgatt
attcaacatgatgactggaagcaagctatgcgcaataagaccaaagagggtaacactata
aacacaccaatgagaaaactgatcaaaaaactacccgaggttgcggcgaaagtattcaac
aggtgtgtcaagacgaatgggctccctgtggaccacccgcagtacgcatttacacttagt
tatgagtttctggatgacgtcagtcttgaatgggctggcttcgtgacgtcacagtcagct
gatcacgaggaaactggattagatgcagtcatgtacaaaatcaaatcggcgttaccagaa
aacgctagcaagcaagtggagatcaagagcaatcacccactaatgcttatggtcactaaa
gaacgtgtcaaacttctaagtcatccgcttgtcacttatctccttcgctataaatggagc
agctttgctcggtatgtctactatggtcgtcttattctgtatggcatattcctgtttttc
ctgactggctacgctatgcacacaacaaagagtatttcaattgccgagtgcaaagaagac
caatgtgcatgtaatgtgacatttcaacaaggaagcgtgggaagccgtgtgctgtggaga
caaattggtcggcctgtgattctcactactacatctattagtattttcttagaggttatt
cagttttgttatgtgtggcgactctacttaaaatggaacagattgattgaattgtttgcc
tacatcatctcaatggtttacatcgtgaatgatttccaacatgatgaaaaaagcttcaaa
ataggcaatggagaaaggtgttttgtatggcacaacagtctaggtgcgaccgcagtctac
ctatcgtggatcggactcgttcttgtcatgcgcaagtttcccaagctgggcatctacgta
gtgatgtttactgatatcttcaagacatttgctcagttctttgtcgtgtgcttcttgttc
attgttgcctttggcttagggtttcatattcttttgtatgatcaggttccctattccact
cctggccgtgcattactcaagacaacaatgggaatgttaggagaatatgaatacgataca
gtttacaatgatcatgttgtaccacctgtcacgtggatattgtacgtggcatttctcgtc
actaactgcgtaattatcatgaatttgttggtgggtttagctgtagatgacatcaaggga
gttcaagagaaagcggtactaaagagactggcaatgcaggttgatctcgctttagatgtt
gaaaaggcgctgccagccatcttgagacaacgttttgcaaccacacaggaagtcatttat
ccaaacgggagcaagtactggacgatttggtcattttggaaccaaggcgcaagtcctgca
catgcttttaatgaagccatgaatcctgagaagacaccaattgagaaacttcaaaaccat
caggaggcgttaaaaaaagaagttatgagcgtgaagtcaaagctcaaagctgtgtttgaa
cacacaacgcagctggaagccatgatgaaggcactcatgaagcatcacggtatatctgtg
gaagcggaggaagaaggcgaagatgatgactag
DBGET
integrated database retrieval system
