Acropora millepora: 114954806
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Entry
114954806 CDS
T06134
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
amil
Acropora millepora
Pathway
amil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114954806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amil03021
]
114954806
03019 Messenger RNA biogenesis [BR:
amil03019
]
114954806
Enzymes [BR:
amil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
114954806
Transcription machinery [BR:
amil03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114954806
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114954806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
114954806
NCBI-ProteinID:
XP_029187304
LinkDB
All DBs
Position
6:complement(8088113..8100428)
Genome browser
AA seq
200 aa
AA seq
DB search
MPFNLKNMVLKLRIAVVCSSNQNRSMEAHSFLSKRGFNVKSYGSGVQVKLPGPAPDRPNT
YSFETTYDEMYRDLLKKDPQLYKQNGILHMLDRNRRIKPHPERFQETEEEFDLVVTVEER
VYDQVIEYLNSRVAQSCSPVHVVNLDIQDNHEEATLGAFLICEMCQAIEGLDDLENEIDL
VIPKLEKKWSRNLLHSVAFY
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcaacctgaaaaatatggttctcaaattaagaatcgccgtcgtttgctccagc
aaccaaaaccgaagtatggaggctcatagctttctaagcaagcgtggattcaacgtcaaa
tcttatggttcgggagttcaagtgaagttaccgggccctgccccagaccgaccaaacaca
tattcatttgaaacgacgtacgatgaaatgtacagggatttactgaaaaaagaccctcaa
ctatacaaacaaaatgggatcctccacatgcttgataggaacagaagaataaaaccacac
cctgaaagattccaagaaactgaagaagagtttgatcttgtggtgactgttgaggagcga
gtgtatgatcaagttattgaatatctcaattcaagagttgcgcaaagctgttccccagtc
catgtggtaaacctggatattcaagataatcacgaagaggcaactctaggagcatttctt
atatgtgaaatgtgccaagctattgagggcctggatgacttagaaaatgaaattgatctt
gttattcccaaacttgaaaagaagtggtcaagaaatttgcttcattcagttgctttctac
taa
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