Acropora millepora: 114955028
Help
Entry
114955028 CDS
T06134
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
amil
Acropora millepora
Pathway
amil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114955028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amil04121
]
114955028
Enzymes [BR:
amil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114955028
Ubiquitin system [BR:
amil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114955028
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114955028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
zf-C3HC4_2
WDR55
EIF3I
Beta-prop_RIG_2nd
zf-C3HC4
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
zf-RING_UBOX
zf-RING_2
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_EML
zf-C3HC4_3
ANAPC4_WD40
zf-RING_5
PEP5_VPS11_N
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_like
Beta-prop_IFT122_1st
Beta-prop_Vps41
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
zf-rbx1
Beta-prop_SCAP
Sina_RING
TRAF3_RING
FemAB
WDR54
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
114955028
NCBI-ProteinID:
XP_029187602
LinkDB
All DBs
Position
11:complement(6861993..6880685)
Genome browser
AA seq
664 aa
AA seq
DB search
MSQLSQSSSSTSSAQSRGGRRRKRPHPPVYGGIMNSFSDRNSDFVCPICFDIIDEAFMTK
CGHTFCYECITRSLEESNRCPKCNYIIDKPDQIFPNFLLNELVQKVKERSGQKRGKVTPK
SQLQGSVNGIQEILSGEIEWDLADVNYVLDVLTQKKQQLEADSQAVQHELLKDFLSQVKR
HKQEQLDQLTREVKLIDEDMKRVKEMIATHNRQYPLPVPLTLPGAERLLVNDVDHAVPTT
PTAKTAPLAVGSDVEPSTSHDYPCDQTETAQDGFNGSQHGAKHFLCSTSLASRRKRIHQH
FDDLERCYFSIRQGDFPSDTGTSDALDYFTDSLAKFTKFSGFRCLATLSYASDIYNGSSI
VSSIEFDRDFDYFAIAGVTKKIKVFEYGTVIRDVVDIHCPVNEMVCNSKISSICWSSYHK
GLLASSDYEGTVTLWDAFTGSKTRSFQEHEKRCWSVDFNHVDPKLLASGSDDAKVKLWST
DMEHSVACLEAKANVCCVKFNPESRYHLSFGSADHCVHYYDLRNTTLPITVFKGHRKAVS
YTKFINTEEIVSASTDSQLKLWNISKPHCLRTFKGHINEKNFVGLASNGDYVACGSENNS
LYLYYKGLSKQLLTFKFDTVRSVLEKDKKEDDANEFVSAVCWRTGSNVVVAANSQGTIKV
LELV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagctgtcacagtcgtcaagttcgacctcgtccgcgcaaagtagaggaggacgt
cgacgcaaaagacctcatcctccagtgtatggcggtattatgaattcctttagcgacagg
aacagtgactttgtttgtccgatatgttttgatatcatcgatgaggcttttatgacaaaa
tgtggacatacattctgttatgaatgtataactcgaagcttggaggaaagcaaccgctgt
cccaagtgtaattacatcatagacaagcctgatcaaatattcccaaattttctcttgaat
gaacttgtgcagaaagtgaaagagagatctggccaaaaaaggggtaaagtgactcccaag
tcacagttgcagggttcagtcaatggtattcaagagattttgtcaggagaaattgagtgg
gatttagcagatgtaaattacgtgctggatgtattgacacaaaagaagcaacagctggaa
gcagatagtcaagctgtgcaacatgagcttctaaaagattttttgtcacaagtcaagcgg
cataagcaagagcaattggatcagttgacaagagaagtcaagctcattgacgaagacatg
aaacgagtaaaagaaatgatagcaacacataaccgacaatatccactgccagttcctttg
actctgccaggggcagagcgtctcttggtcaatgatgtggatcatgctgttccaactaca
cccacagcaaaaactgctccacttgcggtcggatccgatgtggaaccttcaacaagtcat
gattacccctgcgatcagacagaaactgctcaagatggctttaatggaagccagcatgga
gccaagcatttcttgtgtagcaccagtttggcttcaagaagaaaacgaattcatcaacac
tttgatgaccttgagagatgctacttttccatcagacagggagactttccaagtgatact
ggtacatcagatgcgttggattatttcacggatagtcttgcaaaatttacaaagttcagt
ggattccgctgcttagctacacttagttatgccagtgatatttacaatggatcgagtatc
gtttcaagtattgagtttgaccgcgattttgactactttgcaattgctggggttaccaag
aaaattaaggtatttgaatatggcaccgtgatcagagatgtagtcgatattcactgtcct
gtcaatgaaatggtctgcaattcaaaaattagttccatctgttggagttcgtaccacaaa
ggcttactggccagtagtgactacgaaggcaccgttacactctgggacgcgtttacagga
tcaaaaaccaggtcttttcaggaacacgaaaaaaggtgttggagcgtggattttaatcac
gtggatcccaaactactcgcctccggatctgatgacgcgaaagtcaagctgtggtcgaca
gacatggaacattccgtcgcctgtttggaagccaaagcaaatgtttgttgcgtcaaattt
aatccagagagtagatatcacttatcgtttggatcagcagatcattgtgtccattattat
gatttacggaacactacgcttccaataacagtttttaaaggtcacaggaaggcagtgtcc
tacaccaaatttatcaacactgaagaaattgtatctgcatcaaccgatagtcagttgaaa
ttgtggaatataagtaagccgcactgtcttcgaactttcaaaggccacatcaacgaaaag
aactttgtaggactagcttccaatggagattatgttgcctgtggaagtgaaaacaactcg
ctatatttatactacaagggcctttccaaacagttactcacatttaaatttgacactgtg
cgaagcgttttggaaaaagacaagaaagaagatgacgctaatgaatttgtaagcgccgtt
tgttggagaactggttctaacgttgtagtggctgcaaatagtcaggggaccataaaggtt
ctggagctggtttga
DBGET
integrated database retrieval system
