Acropora millepora: 114955148
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Entry
114955148 CDS
T06134
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(I) chain-like
KO
K19719
collagen type II alpha
Organism
amil
Acropora millepora
Pathway
amil04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114955148
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
amil00536
]
114955148
Glycosaminoglycan binding proteins [BR:
amil00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114955148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
COLFI
VWA_2
WAP
EAL
Motif
Other DBs
NCBI-GeneID:
114955148
NCBI-ProteinID:
XP_029187764
LinkDB
All DBs
Position
7:complement(244879..284426)
Genome browser
AA seq
2354 aa
AA seq
DB search
MILGQATVVVFCLGFLIQQLHAQKSVCPKVAKYGAECPFDADNECFSDQECSGSRKCCPS
PYDDEACQLLCLEPITQTNCPVPVDFAFILDGSGSISSKNWVVIKNFIKQIIDNFEVSTD
VSQMALLEYSTNATVYLRFNDLTGAQLNSVNVKRKVEEILQSKGLTFIDKALTLANQEIF
TERNGMRPGVKKIALVLTDGTQTPQPSPEISEENLSIAAQSLRDKGVDVLAMGIGKDVNP
FQLLTIASDENNLYVAKVFDELLGMVGELSKRECLACSESVDVVFGIPTSQTIPLDHFQS
IKKFFGDIIDSFDIDPMKVHVGLVTYSGTASTALTINQLDSDDVIKEFTNQLSQQGTQVN
VASALTEAAHNTFTIFGGVRQSSPKAFVLVVPEGSVNSRQEVLTAAERLKSLGVRLFIVG
VGAGIDENLLRLSSSQPYAKFFHNIPDHKTLFIKSRDIAEVVCKGKVGKCPLAPARQSSS
CSQGPEHECDVDADCKSGRRPLCCQDSCNQRYCAGQIRNCFKPLDVAIAIENSGALGSSD
FNDVKRFAKKLIRRLSSSENNIHFALLEYGENATVLTDFRKYRDQLFLESLIDNITKRED
SQKRVDVALESVKENIFSLKGGMRQVPRFLIFIASDESTSDFNGRDGAAKELRAMDVMVV
AIATNGDVADAFLEKLSGFNSLVYKADVANELSGLVLGDLSYKLCGEKPGKCPIVDTPDP
LLCQSLEPSPGSVLCGSSTNGGLNGDADCAGEEKCCLDSETGCFQVCTLPPNVCNKNFDL
TILIEHSPTFGKSEFGKLKAFARHLVDAFDVTEGGTQVAVVSYGAKPIIHVLLNSFTGPQ
LRSRIIKETIDGIDFQKDEDSVSPSAALAKTLDTVFADGNGARNGTNKTVVLITEGKFAD
SAAAEKAAVQIRXQVADLFVVAIGDKPDVDSLVKMVSPPTERNVFLASTPNALQANLRGL
TDAICKGAEKMKTVIGPPGDPGPPGPSGTVGPLGPEGETGDRGDPGDPGGTGPPGPPGPP
GPPGPPGPSTEGGPSNLGSRVKGPPPRTMDGEKGPLTGAVTNREAVEPVKGPPGKPGLPG
PPGRRGIKGVAGSRGRVGIRGEMGVAGYPGPPGLPGRNGMDGWDGKRGNLGRQGEPGEKG
APGDAGIAGRSGLKGPQGPSGSAGSRGDRGEEGERGAQGIDGNPGTNGKLGKQGPFGPLG
KTGSTGAPGPPGTKGGEGPEGDQGAMGPPGTPGPPGLVGHNGQVGRPGLPGYMGYSGESG
AMGSIGPKGSPGIDGETGPTGPAGNKGSIGDHGAAGEMGLPGRDGNAGSTGADGPPGYQG
SSGDYGKPGTKGKGGDKGKPGSDGVQGRRGFPGRRGKRGAFGGTGPPGEMGIDGNRGFPG
PPGHMGPVGQRGEKGVPGETGSQGNSGRSGDRGDDGDYGPLGPTGKQGLRGVAGRTGRPG
SSGLHGDEGDSGIPGEDGSPGIPGSPGIAGPVGVKGAQGMPGEVGIQGEDGPEGPKGGLG
PTGAIGAPGFNGQPGPGGELGETGSTGPQGEKGLPGPPGPGGESGAPGTKGFKGGVGLDG
LHGNQGSNGLSGKKGESGESGVPGEAGGRGDQGRPGQHGLPGPIGVAGLVGPIGSMGSVG
MLGPPGDSGSKGETGDQGAKGNRGKRGTDGRDGTNGVPGKRGSRGSSGGKGRSGDPGVPG
LPGNGGEKGPTGEKGSSGNSGFDGVEGSAGPVGTRGLPGGSGMKGALGEDGSAGAMGDQG
PEGAPGHYGIKGIQGDRGSMGDRGILGGTGPQGPAGPTGELGVAGSPGKSGKPGPTGSRG
RGGLPGSTGVDGRPGHNGPDGLAGTRGVTGFQGRPGAIGPPGPPGQSGTMGLHGLMGRRG
NIGETGEKGEAGESGERGKDGGTGKQGEAGVAGMMGSPGDVGNIGPGGLMGTIGSQGRPG
PKGEVGQHGTQGSAGLPGGRGIPGPPGMSGPPGPSGSDGTFGKTGDPGLRGRSGATGNGG
EPGDGGSKGAVGSKGDRGDPGSQGPDGGPGLKGPEGSAGLRGERGVRGERGSKGLQGSPG
EEGRQGSQGSEGPQGYQGQTGDPGIRGIAGEPGPPGIPGPPGPTPDLGALRGYIQTWNND
RRAYDLGGEKAQLYRSTKKEDASSIDPFEVNLALLHYQLELLKKPNGTKEFPAKTCKELS
MCYPHLESGVFWVDPNEGVPEDAISVYCDFSFNATCLFSSEERKPFVSPKRKWYSGLDEY
KWLSADLGAFEKLKYVPRSSQLLFLRLLSDRAVQNITYHCKNSVAWHSEHLTDVKRSLKF
KTANGVIIHSSSSNKFKPRVITDGCRVKNGTWLQTVIQIDTTKPNRLPIVDVAAYDIGDN
GEEFGLEIGPVCFY
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgattcttggacaagccacagttgtggtattttgcctcggattcctgatccagcaatta
cacgctcaaaagagcgtttgccccaaggtagcaaaatatggcgctgagtgtccttttgac
gcggataatgagtgcttctcagatcaagaatgctcaggaagcagaaagtgctgtccatct
ccgtatgatgatgaagcttgtcaacttctctgcttagaaccgataacacaaacaaactgc
cctgttccagttgattttgcattcattctggatggctctggtagcatctcttcaaaaaac
tgggtggttatcaagaatttcattaagcaaatcattgacaatttcgaagtgtctacagac
gtttctcaaatggctttgctggaatacagcactaatgccacagtctacctaagattcaac
gacctcactggtgcacagctcaacagcgtcaacgtaaaacggaaagtcgaggaaattttg
caatcaaaaggattgacattcattgataaagcactgactttagctaatcaggaaattttt
acggaaagaaatggcatgaggccaggcgtaaagaagatagccttggtgctaacggacgga
acacagactccgcagccctccccagaaatatctgaggagaacctttccatcgcagctcaa
agtctgcgcgacaaaggtgtggatgtccttgccatgggaataggaaaagacgtcaatcca
ttccagttacttaccattgcttcggacgaaaacaatctgtatgttgctaaagtgtttgac
gagctcttaggcatggttggagagcttagtaagcgagaatgcttagcttgttctgaaagc
gttgacgtcgtgttcggaattccaacgtcccagaccattccattggatcattttcaaagt
atcaagaaattcttcggcgatatcattgactcgtttgatatcgaccccatgaaagtgcac
gtgggtttggtaacatacagtgggacagcatcgaccgccctgacgatcaaccaattggat
tcggatgatgttatcaaagaattcaccaatcaactctctcaacaaggaacacaagtaaac
gttgcctccgctttgacagaagctgctcataacacttttactatattcggaggcgttcgg
caatcctcgccgaaagctttcgttctcgttgtacccgaaggctctgttaacagtcgacaa
gaggttttgactgctgctgaaagacttaaaagtttgggagtcaggttattcatcgtcggc
gttggagctggaattgacgaaaatcttctgcgactttcgtcatctcagccctatgcaaag
ttcttccacaacatcccagatcataagactctcttcatcaagagtagagacatcgcagag
gttgtttgtaaaggtaaagtcggtaagtgtcccctcgctcctgctcggcaaagttcaagc
tgctcacaaggccctgagcacgagtgtgatgttgatgccgattgcaagagtggacggcgg
cccttgtgctgtcaagatagctgtaaccaacgatactgcgctggtcaaataagaaactgc
tttaaaccattggacgtagccattgcaatagagaattccggagccctaggaagcagcgat
ttcaacgatgtgaaacgtttcgctaagaaacttatcagacgactttccagctcagaaaac
aacattcacttcgctcttcttgaatacggtgaaaacgcaactgttttgacagattttcga
aaataccgagaccaacttttcttagagagtcttatcgacaacatcaccaagagagaggat
tcccagaaaagggtcgacgttgccttggagtcggttaaagaaaatatttttagtttgaaa
ggggggatgaggcaagttcctcgtttcctcatattcattgcgtccgatgaatccacgtca
gattttaacggtcgtgacggagctgcgaaggaactcagagccatggacgttatggtcgtt
gccatagcaaccaatggtgatgttgcggacgcgttcttggaaaaactgagcgggttcaac
tctttggtttacaaagcagacgtggcaaatgaactaagtggtttggtattgggtgacctg
tcgtacaaattgtgcggagagaaacctggtaaatgccctatcgttgacacgccggatccg
ttgttgtgtcagtctttagagcccagtcccggatctgtgctgtgcggttcctcaacaaat
ggcggtttgaatggtgatgcagattgtgccggcgaagagaagtgctgtttggattctgaa
acgggctgctttcaagtttgtacactccctccgaacgtttgcaacaaaaacttcgatttg
accatacttattgaacattcgcccacatttggaaaatcggaatttggaaagttgaaagca
ttcgcaaggcatcttgtggacgcttttgatgttacggaaggcggaacacaagtcgctgtt
gtcagttatggagctaagccaatcattcacgtgctcttgaactcattcactggaccacaa
ctccgaagtaggatcattaaggagacaatcgacgggatcgattttcagaaggatgaggat
tccgtttcaccgagtgctgcccttgctaaaacattggatacagtttttgcagacggcaat
ggagctcgcaatgggacaaataagacagttgtactaataactgaaggcaagttcgcagac
tccgccgccgccgagaaggccgctgtccaaatcaggnaccaagttgcagatctgtttgta
gttgctattggtgacaagccagacgtagacagtctcgttaagatggtgtccccgccaact
gaaaggaatgtcttcttggcaagcacgcccaacgccctccaagcgaatctcaggggatta
accgatgccatctgtaaaggagctgagaaaatgaagacggtcattggtcctccaggggat
ccaggccctcccggcccttcgggaactgtgggacctcttggaccagagggagaaacagga
gaccggggtgatccgggagatccagggggaacggggcctcccgggcctccgggtcctccg
ggaccaccaggaccaccgggaccatcaactgaaggtgggccttccaatcttggttctaga
gtgaaaggtcctcccccaagaactatggatggggagaagggacctcttactggcgcggta
accaacagggaagcagtcgaaccggttaagggaccaccaggaaaacctgggttgccaggc
ccaccaggacgtcgagggataaaaggcgtcgcaggaagccgaggtcgagtggggattaga
ggagagatgggcgtagccggataccctggccctccgggtttaccaggcaggaatggtatg
gatggatgggacggaaagcgaggcaatctgggaagacaaggagagcccggggaaaagggt
gctccaggagatgcaggtattgctggccgctcaggcctaaaaggaccgcaagggccgagc
ggttcagccggctcgagaggggatcggggcgaagaaggtgaaaggggtgcacaaggaatc
gatggaaacccaggaaccaatggaaaactgggaaaacaagggccttttggccctcttgga
aaaactggatctactggtgctcctgggcctcctggaactaagggaggcgaaggtcctgaa
ggagaccagggtgcaatgggtccaccgggaactcctggcccccctggactagtggggcac
aacggacaagtgggaaggccaggtcttcccgggtatatgggttactcaggtgaaagtggt
gctatgggatccattggaccaaaaggttccccagggatagatggagaaaccggcccaact
ggaccagcaggaaataagggttccattggcgaccatggtgctgcaggagagatgggcctt
ccaggaagagatggtaatgcgggtagcacaggcgcggatgggccaccaggataccaagga
tcttcgggagattacggaaagcctgggactaagggcaaaggtggagacaaaggaaaaccg
ggaagtgacggcgtgcagggacggcgtggtttccctgggagaaggggaaaacggggagca
ttcggcggcacaggacccccaggcgagatgggcattgatggcaatagaggtttcccagga
ccgccaggacacatgggacctgttggacaacgcggagaaaagggtgtgcctggagaaaca
ggatcgcaaggaaactcgggaaggtcaggtgataggggagatgatggagattacggacct
ttgggtcccactggaaaacagggtttacggggagtagcaggacggacaggccgaccagga
tcttcaggcttgcacggcgatgaaggggattcggggatccccggtgaagacggatctccg
ggtattcccggcagcccaggaattgcagggccagttggcgtaaaaggagcgcagggaatg
ccaggagaggttggaatacaaggagaagatggacccgagggaccaaagggcggtcttggg
ccaactggagcaatcggagcgcctggttttaatggacaaccggggcctggtggcgagtta
ggtgagacgggctcaactggacctcaaggagaaaagggcttaccaggccctccagggcca
ggaggagaatccggggcgcctggaacaaagggtttcaaaggtggcgttggacttgacggt
ctccatggaaaccagggttccaatggtctctctggcaagaagggagaaagtggagaaagt
ggcgtacccggcgaagcaggtggacgtggggaccaaggaagacctggacaacacggattg
cctggtccgattggagttgctggacttgttggtcccatcggatccatgggctcggtgggg
atgcttggtccacccggtgactctggctccaagggtgaaacgggtgaccaaggagctaag
ggaaacagaggcaaacgaggtaccgacggacgcgatggaactaacggcgtccctggaaaa
cgtggatctcgcggtagcagcggcgggaaaggaagatctggagatcctggtgttccaggt
ttacctggaaatggcggagaaaagggtccaacaggagaaaaaggaagctctggaaactct
ggatttgatggggtagaaggatctgctggccccgttggaacacgtggattgcctggcggc
tcaggtatgaagggtgccctaggagaagatggctcggctggagctatgggtgaccaaggc
cctgagggagctccgggtcattatggaataaaaggcattcaaggagatcgcggatcaatg
ggtgatagaggaatcctaggtggtacgggacctcaagggcccgcaggacctacgggagaa
cttggagttgcagggagcccaggcaagagtgggaagcctggaccaacgggttcaagaggc
agaggtgggcttcctgggagcacaggagtcgacggaagaccaggtcacaacggccctgat
ggtttggctggaacaagaggagtaacaggttttcaaggacgacctggagccattgggcct
ccaggcccacctggacaaagtggtacaatgggtcttcatggattgatggggcgcagaggg
aacattggagaaacaggtgaaaagggggaggcaggagaatccggagaaaggggaaaagac
ggaggaacaggaaagcagggtgaggctggtgttgctggtatgatgggctctcctggtgac
gtaggaaacattggaccaggggggctgatgggaacgatcggatcacagggacggcctggg
cccaagggggaggtaggacagcatgggacacaaggcagcgcaggcctaccaggaggacgc
ggtatacctgggcctcctgggatgagtgggccgcctgggcccagtggaagtgatggaacg
tttggaaagacgggtgaccccgggctgcgaggaagatccggtgctacgggaaacggtggg
gagcctggtgacggaggaagtaaaggagcagttggatccaagggggatcgaggcgaccct
ggttcacaggggccagatggaggaccagggctgaagggacctgaaggttctgctggacta
agaggtgaacgtggtgttcgtggagaaaggggctcaaagggattgcaagggtcccccggc
gaagaaggacgccaaggatcgcaaggctctgaaggtccacaaggttatcaaggacaaacg
ggagaccctggaattaggggaattgcaggagagccgggaccccctggaattcccggccca
cctggccccacgccagacttgggtgctctcagaggctacatacagacgtggaacaacgat
cgacgcgcttatgatcttggaggcgagaaagcacagctgtatcgaagcaccaagaaagaa
gacgcatcctcgatagatccatttgaggtaaatttagctctgcttcattatcaacttgaa
ctgctcaagaagccaaatggtacaaaggaatttccagcaaagacttgtaaggagctgagc
atgtgctatccgcatcttgaaagcggtgtgttttgggtggacccaaatgaaggtgtccct
gaagatgcgatcagtgtttactgtgatttctcattcaacgcgacttgtttgttctcaagt
gaagaaagaaagccttttgtttccccaaagagaaagtggtattcaggattggatgaatat
aagtggctaagtgcagatcttggagcctttgaaaagttgaagtatgtcccacgctcgagt
cagttgttgtttttacgtctgctgagcgaccgcgccgtacagaacatcacgtatcactgc
aagaactcagttgcttggcacagcgaacacctcactgatgtcaagagatctctcaaattc
aaaacagcgaacggagtgataattcactccagttcctccaacaaattcaagcccagggtc
atcacagacggttgccgagtcaaaaatggaacatggcttcaaacagttatccaaattgac
acgacaaaacccaaccgacttccgattgtagacgtcgctgcctacgacatcggagacaat
ggcgaggaatttggactcgaaattggacctgtttgtttttattaa
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integrated database retrieval system
