Acropora millepora: 114955302
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Entry
114955302 CDS
T06134
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
amil
Acropora millepora
Pathway
amil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114955302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amil03041
]
114955302
Enzymes [BR:
amil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114955302
Spliceosome [BR:
amil03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
114955302
Complex B
114955302
Complex C
U2 SnRNP specific factors
114955302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
114955302
NCBI-ProteinID:
XP_029187956
LinkDB
All DBs
Position
7:20244728..20262270
Genome browser
AA seq
759 aa
AA seq
DB search
MFQKGGPGKQRGFGFGGFALAAKKEDSLPRNIGRGLPVAQSTAIAKKSTNSQKSQKSGSS
FPLPGARKPIFVDSDNEDDETKFVDDDDEDKITASVVKMENDDGDEEDELDKFMAGIENE
MQKEANMSEKERNEKDKKKVIRDDIEDEDDQESYYNYVKNAPIVAYPDDEEELEYDSDGN
PIAPEKSKIIIPLPAVDHAEIDYMAFSKNFYIEHEEISKLTSHEVQELRRKLALKVSGAL
PVRPSISFAHFGFDEQLMGAIRKLEYIQPTPIQCQAIPVALSGRDIIGIAKTGSGKTAAF
LWPALVHIMDQPELEPGDGPIALICAPTRELCQQIFVEARRFGKVYNINVVAVFGGGNKY
EQSKALQEGAEIVVATPGRLIDHVKAKSTNLQRVTYLVFDEADRMFDMGFEPQVRSIASN
VRPDRQTLLFSATFKKKVEMLCRDILTDPIRVVVGELGEANEDITQIVEILPVGTDKWPW
LTSHLVSFTSAGSVLIFVTKKANSEELAAKLKTHDFEVVLLHGDMDQFERNKVINAFKKQ
EIPILVATDVAARGLDIPSIKTVINYDVARDIHTHTHRIGRTGRAGEKGVAYTLITPTDQ
NFAGDLVRNLEGANQAVPSALMDMAMKNAWFRKSRFQHGKGKASGREGRPRMRERPGLGM
QASSNAHASDGGGLQFSTSDSSSVPSSSLGGVFGSAARNDRKSALKAAFQAQYKSHFCAA
SSSSSNKWDATSQHSTAKPPDRPTKPSKPPVKKSRWDPV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgttccagaaaggtggtccaggtaaacaaagaggatttggcttcggaggtttcgcacta
gcagccaagaaagaagattctttgcccaggaatattggaagaggtcttcctgttgcccag
tcaactgcaattgccaaaaaatcgactaattcccaaaagtctcaaaagagcggctcatca
tttcctcttccaggagccagaaaaccgatctttgtggatagtgataatgaagatgatgaa
acaaaatttgtggatgatgatgacgaagataaaatcacagcatctgttgtgaaaatggaa
aatgatgatggcgatgaggaggatgagttggataaattcatggctggaattgagaatgaa
atgcaaaaagaagcaaatatgtctgagaaggagagaaatgaaaaggacaagaaaaaagtg
ataagagatgacattgaagatgaagatgaccaggaatcttattacaactacgtgaagaat
gcccctattgttgcgtatcctgatgatgaagaggaacttgaatatgacagtgatggcaac
cctattgctccagaaaaatccaagataattatacctcttcctgctgttgaccacgcggag
attgattatatggcattctcgaagaacttttatattgaacatgaggaaatttccaaactt
acctctcacgaagtccaagaattgcggaggaagctggctttgaaggtgtcaggagctttg
cctgtgcggccttcaatcagttttgcacattttggatttgacgagcagctaatgggagca
attagaaagttagaatacatacaaccaacgcccatacagtgccaggcaattccagttgct
ctgagtgggcgcgacatcataggtatcgccaagacgggttctggcaaaacagctgcgttc
ctgtggccagcgttggttcatataatggatcaacctgagttagaaccgggggatggcccc
attgccttaatctgtgcccccaccagagaactctgtcagcagatcttcgtggaagcgcga
cggtttggaaaagtttacaacattaacgtagtggctgtctttggaggaggaaacaagtat
gaacaatctaaggctcttcaagagggtgccgaaatcgtggttgcaactccgggtcgcctc
atagatcatgttaaggcaaaaagcacaaatctacagagagtaacatatcttgtgtttgat
gaggctgatagaatgtttgatatgggttttgaacctcaagtgagatccatcgccagcaat
gttcgtccagataggcagaccttgctgtttagtgcgacattcaagaaaaaagtcgagatg
ctctgtcgtgacattctgacggatccaatcagggttgtagtcggggaacttggagaagcg
aatgaagacatcacgcagattgtagagattttaccagtaggcacggacaaatggccctgg
ttgacaagtcacttggtctctttcacatcggctggcagtgtgcttatctttgttacgaaa
aaggccaacagcgaggagctggctgcgaagttgaagacgcacgattttgaagttgttctg
cttcatggagacatggaccaattcgaacgaaacaaggttatcaacgctttcaagaagcaa
gaaattccaatattagtcgctacggacgtagcagcccgtggattggacattccttccatc
aagactgtcataaattatgacgttgcacgtgatattcacacgcacactcatcgaattggt
cgaactggcagagcgggggaaaaaggcgtggcctacactttgataaccccaactgatcag
aactttgcgggagatcttgtgcgcaatttggaaggggccaatcaggctgtaccgagcgct
ctaatggacatggctatgaagaatgcgtggttccgtaagtccagatttcagcacggtaaa
gggaaagcgagtggccgagaaggaagaccgcgcatgcgtgaaaggcctggtttaggaatg
caggcatcctcgaatgcccacgcaagcgacggtggcggtttacagttttccacttcagat
tcgtcgtccgtaccgtcgtcttcgctcggcggagtgttcggctctgcggcgagaaacgat
cgaaaatcggctcttaaagcagctttccaggcccagtacaaatctcacttctgcgctgct
tcttcatcctcttcaaacaagtgggatgccacgagccagcatagtactgccaagccaccc
gaccgacccaccaagccctcgaaacctcctgtcaagaaatcgagatgggatcccgtttag
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