Acropora millepora: 114955417
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Entry
114955417 CDS
T06134
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
amil
Acropora millepora
Pathway
amil03030
DNA replication
amil03410
Base excision repair
amil03420
Nucleotide excision repair
amil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114955417
03410 Base excision repair
114955417
03420 Nucleotide excision repair
114955417
03430 Mismatch repair
114955417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amil03032
]
114955417
03036 Chromosome and associated proteins [BR:
amil03036
]
114955417
03400 DNA repair and recombination proteins [BR:
amil03400
]
114955417
DNA replication proteins [BR:
amil03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114955417
DNA Replication Termination Factors
ELG1-RFC complex
114955417
Chromosome and associated proteins [BR:
amil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114955417
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114955417
Check point factors
HRAD17(Rad24)-RFC complex
114955417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_11
AAA_22
AAA_lid_RFC1
AAA_30
SLFN-g3_helicase
AAA_assoc_2
AAA_14
AAA_19
ResIII
RuvB_N
DUF815
Mg_chelatase
Gp44_lid
AAA_3
AAA_24
AAA_5
AAA_28
bpMoxR
AAA_7
nSTAND3
ATPase_2
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
114955417
NCBI-ProteinID:
XP_044180147
LinkDB
All DBs
Position
8:17013964..17022738
Genome browser
AA seq
364 aa
AA seq
DB search
MDTFLRGQSSANSSKSKQAASGETAGISNKRVTVPWVEKYRPRSVDDVAYQDEVVSVLKK
SLEGADLPNLLFYGPPGTGKTSTILAIARQLFGSDMMKARVLELNASDERGIQVVRDKVK
TFAQHAASGVRPDGKPCPAFKLVILDEADSMTPSAQAALRRTMEKETKSTRFCLICNYVS
RIIEPLTSRCSKFRFKPLSTETLEKRLNMICGEENVKCEXQGMAIHELIKISEGDMRKAI
TYLQSAYRLKGEDTVEAKDITEIAGVVPDKMADKLFEACGTDSFDKLDSTVKEIIAEGHA
AAQVINQVHDRVVEMTELNDHQKSAITEKLAIVDKCLCDGADEYLQILSLCSVMMQQFCH
AGQT
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggatacctttcttcgtggacaaagttctgcgaattcgtcaaagtcaaagcaggcagca
agcggggaaactgctggaatttccaacaagcgagtcactgtaccctgggtagaaaaatac
cgtcccagatcagtggatgatgttgcatatcaagatgaagttgtttctgtgttaaagaaa
tctctagaaggagctgaccttccaaatctgttgttttatggcccccctggaacagggaag
acctccactatactggctatagcaaggcagttgtttggatctgacatgatgaaggcaaga
gttcttgagctgaatgcatctgacgagcgtggaatacaggttgtgagagataaagtgaaa
acgtttgcccagcacgcagcatctggtgttaggccagatggtaaaccatgcccagccttt
aagcttgttattcttgatgaggcagattccatgacaccaagtgctcaggcagccttgaga
agaaccatggagaaggaaacaaagtcaacaagattttgcttgatatgtaattatgttagc
agaattattgagccattgacttctcgatgttcaaagtttcggttcaagccactctcaaca
gaaacactggagaaaaggctgaacatgatttgtggagaagaaaatgtgaaatgcgaataa
caaggtatggcaatccatgaactaataaaaatatcagagggagacatgagaaaggctata
acctatttacaaagtgcgtacagattgaaaggagaagatactgtggaagcaaaggatatc
acagaaatagctggggttgttcctgataaaatggctgacaaactgtttgaagcttgtggt
acagactcttttgacaaactagattccactgtaaaggaaatcatagcggaaggacatgcc
gcggctcaggttatcaaccaggttcatgatagggttgtggaaatgacagagttgaatgac
caccagaaatctgccataacggaaaaactcgctatcgtggacaaatgtttgtgcgatggt
gctgatgagtacttacagatactcagcttgtgttccgtaatgatgcaacagttttgtcat
gccggacaaacctaa
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