Acropora millepora: 114957395
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Entry
114957395 CDS
T06134
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amil03009
]
114957395
Ribosome biogenesis [BR:
amil03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114957395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
BIG2_C
Motif
Other DBs
NCBI-GeneID:
114957395
NCBI-ProteinID:
XP_029190638
LinkDB
All DBs
Position
2:complement(22589291..22629862)
Genome browser
AA seq
2761 aa
AA seq
DB search
MADEEGAIDVIEERKKRRNPRFKGFRQRIAAIKVDVIHTIHKRPRTEIPENEDTFFCQAL
SKWTELNCTLHFQKFSSKVSAYVQSLAQLVHHKEEVIDLLKEHLQIPGSLALLSLLDLVV
QLAKDLQGDFYPFFGSFFEIFLSLLSRYSQEPRVLECIFQTLGHLFKFLWRNMVKDMKNV
LSLYQPLFERRQKPYIQQFAAESCSFLMRKVKDSGRLFDIIFSALDMQPDLSHGLGLLCF
EMLKGVKKQFHSMTEVVLPVLLGKLGHFQKLPVGCSVKHLQWELVFETLAEMLERMAEHT
GKKHCQVVERSLVQELERLSSIYNGEQLNSEQVESLKSQLSRVVKLLDCWVSWKSENLIS
EPVKIFHVLQGMITRDFLSDPITSPLLKLTSSLLLASFTEFPADHQKELTSKVFDTVDEF
KPLATFCRHLLPWQNFQEDILPLCLNRCQSVILKSPCSSLEVVQLLAVVTLYSCTADEGG
LHLESKQDALFFPSCSARQGAKMSKFFLDNLNIPQDALMDDSRLALIWGVLVCLPCIKPL
DTSRCCEKLRGMIQSTIELLLSNERARHRVACLSVLSQAIQSFSLLGSTEDQRTFVLDFN
FFRTLISSWPNSIHILQACYKLVTVASQQGIQGFLTAENLAETYSYVRLNLCSASHVIRL
ATLKILACFDQHEMPLASSKYALFQLCARVEEIPIRLDTYRDRLLRLQDLRYSSTYFGSL
PQFYFEAAVLYLCGMLYVNFNLLWDPVIELITSFTRGDDAKHFWEIYRDVLNTAADKAES
ELNRGMESGNCHQAATRKSESENGDPMETLEDIFANYNSYSHGPQHENRGDHTNFRYLLW
KAMASFPKIAERRSNDVVPLFLRFVSNEYYVATESAAPSQDIRAKQILDNREAHTTDELE
ESEFEISEEDNPTSEPKNAYKRRHYAATKSLCIHLSLFTVFKSPKSLFKEREVMQLLNKF
LTHRDGEVQTLVVKCLMNYKFNYLCPYKENIERLLQDESFREELAHFSVDEEEGIVDVSH
REGLMPILIRLLYGKMLRFTGPGTSGKAGVSARRSVVLRYLASCPPNELQIFMDLVLAPF
KHLCTAKDPGRIIVTKDLSKIVPLKKQQSFLSMASQILNLLGEKIVASSFHSCILQIILS
LLSSCVFALEQRHLVRPPFISQLKTIRQLAVTRLTEFFENLIDFDVKPICDGVFSYAVWP
QIENLCLDSTQNPTALFKLLFTWSKHPRYLPLLSRKSLEKPDLSIMSCVFACLRFSKTSP
AMLAMVIEMTDNLLSAVGSEGSDLLELGSELRPPSAYSLKNRPSYGTLLVLPHLSEILEC
LSRSVKQAVENNEKIQGKCKLAIPPRELSVLSKLSPFVQDAKQSATLLEALIPSLSDARK
EEAANRILATVKGLLANVESPMTFVIPLCKPFSWIKDRSTRQCLCEVFLKLSNIDPSFSL
KASELLRMINSWDDKRLEEPDYDTRLAGFAEVRACLQRGELKQEEILAILNNCIYFVLNS
TDMSLRDSGGSSMSCILRYVLQKSAENKEAFNLLVIENLLPACKKAIASKNEVARNEFLS
LLSMMVRGCEHESWSDLTVLLNDDPEKDFFENMKHIQLHRRVRALRLLQLHCQKHTFKTT
TLTSYLLPLATRCIFENKDSQLISEGITTIGAISAILPWFHYCHLLRHYLRLLPLEKNAQ
KVIVRVVVIILNNFHFDLSSVSDQSESFSPIEIHVEKDNVSQNATVDKEGKDPNVASEIE
ADAKNDDKESSKGDDQGDLDDDGEDYAAEEKTTDEDPLDIYKTISLSILPELQKYATKER
TSDSFHRLSRMKAEDEKEILRVPVLLAIIKLLQALPEHALHLHLPGLLLKACNILKSKSN
EVRVAARETLTKITISLGIKYLPFIVEQLRGVLRTGYQLHVLSFTLHRLLEKLSSSLNPG
DLDPGLQDIVEVLVEDLFGEVAKEREVEKIANKLPEAKTCKSCDTFEILSRFVEAQSLNK
LITPLKEILDSTKSQKTARLVEEVLRRISVGLQSNQSMTVPLQLIFIHGLASENMTLLKP
KPVNNTVAPEVADIRLRPESSLLLPPSPKRGGNVPQPNEKTNHHILIEFGLQMLYLLLKQ
GKISTSNEEQLRMLDPFVELLTDCLESKHNKMVTVAVRCVCQLVKFPLPSLARFVPKIGK
QLFQLLKIYARAGAKVGENYEMVLSAFKGMTVIIRNHKHFKVAEKQLQVLLGFVEEDIHD
HSKQGAAFPLLKAILSRKLIVPEIHDVMGKVGQLSITSSSQNVQLQCRQCLLLFLLDYPL
GKKLQGYLEFYVSQLGYEYEKGRQSALEMLGSMFSSFPEETVAENASFFFIPLTTRLVND
DSANCRQLAGYTIQLLLKKLDADQRNKLFSITLLWFKDEKVAVQRLAAQVWGLFVEVEGK
NFDRKLTNLLPIISDAIVPERFEGEECVDDKEVDSNGQIAKRPKDHLLFNVLSLLAKIMK
ECQVIKNPSRQEEMTKIWGSVEEHLLHPHVWVRLASSRLLGLLFAAWKPEELVTNFLEGK
TSRSYLQQDLPAKVTKLCEVICRQFRSQLLNSELGEQMVKNLVFLAKTLQILSSEGSPIA
ENNRDRHASNENLTSKEGPLTLKDLLRKLNKEATLEDSLATRQTQKRNCVLRLVSAVAIN
LGRDGVEPFLTDILKPIHRELEIPSSFKDPDLKTLALEALDLIKGLAKRDAVSQAYAILQ
KATIKTRETRRKKKALEAVADPLMAARKKVKKNQAKEASRKRKLDRLRPERRLKAPRMQN
A
NT seq
8286 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagaaggagctatcgatgtaatagaagaaagaaaaaagcggaggaacccc
cggtttaagggttttcgccagcgtattgcagccattaaggttgatgtgatccacacgatt
cacaaacgaccgcggacagaaattcctgagaatgaagacacgttcttttgtcaagctctg
tcgaaatggacagagttaaactgtactctacattttcaaaaattttcttccaaggtcagt
gcgtatgtgcaaagtctggctcagcttgttcatcacaaggaagaagtgatcgatctgctg
aaagaacatctgcagattccaggaagtcttgctttgctgtcactgttagatctcgttgtc
cagctagcgaaagacttacaaggagacttttatcctttctttggtagcttctttgagata
tttttgtcgttattaagtcggtattcgcaagaaccacgcgtcttggaatgcatcttccaa
actctgggacacttattcaagtttctttggagaaacatggtaaaagatatgaaaaatgtg
ctcagtttataccagccgctttttgagaggcgacagaaaccgtacatccaacaatttgca
gcagagagttgttccttcttaatgcgaaaagtgaaagactctggacgactatttgacata
attttctctgcacttgacatgcaaccagatttaagtcatggacttggattgttatgtttt
gaaatgctcaagggcgtgaaaaaacagttccattctatgacagaggtggttttacctgtg
ttgcttggtaaacttggacattttcaaaagttgccagttggctgctcagtcaaacatttg
caatgggaattggtgtttgaaacccttgctgaaatgcttgaaagaatggcagaacacact
gggaagaaacactgccaagttgtggagagatcattggttcaagaactggagagactctca
agtatttacaatggtgaacagctgaacagtgagcaagtcgaatctctaaagagtcagttg
tcccgtgttgtgaagttgttggattgttgggtatcctggaagtctgaaaaccttatttct
gaaccagtgaagatttttcatgttcttcaaggaatgataacaagggatttcttatcagat
cccattacctcaccattgctcaagcttacgtcatcccttcttctggcttcgttcactgaa
ttcccggcagatcaccagaaagagctgacatcaaaagtcttcgataccgttgatgaattt
aaaccgttggctactttctgtagacatctgttaccttggcagaacttccaagaggatatt
cttcctttgtgtttaaaccggtgccaatctgtgatcttaaaaagcccctgcagttctctg
gaagttgtgcagttgttggcggtagtcactctatacagctgtacagcagatgaaggtggg
cttcacctggagagtaagcaagatgctctcttttttccaagctgcagcgccaggcaaggt
gcaaagatgtcaaagttcttcttggataacttgaacattccccaagatgcgctgatggat
gacagccgtttagcattgatttggggtgttctcgtgtgtctaccctgtatcaaaccatta
gacacttcccgttgttgcgaaaagcttcgtggaatgattcaatctaccattgaactgctc
ttgtctaacgagcgggctagacatcgtgtggcttgcctgagtgtgcttagccaggccatt
cagtcgttcagtttacttgggtccacggaagaccagcgcacattcgtcttagactttaac
ttctttcggacattaatcagctcatggcccaacagtattcatattctgcaagcttgttac
aagctggtgacggtagcaagtcaacagggaatccagggctttctcaccgcggagaatctt
gcagaaacctacagttatgtccgtttgaatctatgctcagctagtcatgtcatacgtctt
gctactctcaagatactggcttgctttgatcaacacgaaatgcctctggcttccagcaaa
tacgcgttgtttcaattgtgtgcgagggtagaagaaatcccaatacgcttagatacttac
agagaccggctgttgcgtcttcaggatctccgctactcttctacttacttcggctctttg
ccacagttctactttgaagccgctgtactttacttgtgcggcatgctttacgttaatttt
aatcttctgtgggatcctgttatcgaactcatcaccagcttcactcgtggcgacgatgca
aagcacttctgggaaatttatagggatgtccttaatacagcagcagacaaagcagaaagc
gaactaaacagaggaatggaatcagggaattgtcatcaagcagccaccagaaaaagcgaa
tcggaaaacggcgacccaatggagacccttgaggatatctttgctaattataacagttac
tcgcatggtccacaacatgaaaacagaggtgaccatacaaacttccggtatcttttatgg
aaagcaatggcatcttttccgaaaattgcggaacgtaggtcaaatgatgtggtgccgctg
tttctaagatttgtcagcaatgaatattacgtggcaaccgaaagtgcagctccctctcaa
gacatccgagcaaagcagattcttgataatcgcgaggcacacacaacagatgagctcgag
gagtccgagtttgaaatatcagaggaagataatcccacctccgaaccaaaaaacgcatac
aaaaggcgacactatgcggccacgaaatccttgtgcattcatctttctttgttcactgtg
tttaaaagtccaaaatcactgttcaaggaacgtgaggtcatgcagcttcttaacaaattc
ttaacacacagagatggcgaagttcaaacgcttgtggtgaagtgtcttatgaactataag
ttcaactatctttgcccatacaaggagaacattgagcggttattgcaggacgaaagcttt
cgagaggagctggcgcacttctctgttgacgaggaggaaggcattgtggacgtaagtcat
cgagaagggctcatgccaatccttataaggctcctctacggaaaaatgctgcgatttaca
gggcctggcactagtggaaaggcgggcgtcagtgcgaggcgatccgtggtgctgagatac
ctggcctcctgtcctccaaatgaattgcaaatattcatggatttggttttggcgccattt
aagcacctttgcacagcaaaggatcctggtcggatcatcgtcacaaaagacctgtcgaaa
atcgtgcctttaaagaaacagcaatcctttctgtcaatggcctctcagatacttaacttg
ctgggagagaaaatcgttgcttcgtcgtttcattcttgtatcctgcaaatcatcctctca
cttctttcgtcatgtgtgtttgctcttgaacagaggcacctggttcgaccaccatttatt
tctcagctgaagaccattcgtcaactagcagtaactcgactgacggagttctttgaaaac
cttatcgatttcgatgtcaaacctatttgtgacggcgtgttttcttacgccgtttggcct
cagatagagaatctttgtctggacagcactcaaaacccaacagcgttgttcaagttgctg
tttacttggtcaaagcaccctcgctacctccctttgctgtcaaggaaatcacttgaaaag
cccgatctgtcaatcatgtcttgtgtctttgcctgccttcgtttttcaaagacttcacct
gctatgcttgccatggtgattgagatgacagataatctgttatcagccgttggaagtgaa
ggaagtgatttattggaacttggttctgaacttcgtcctcccagtgcttacagtctgaaa
aacagacccagttatggaactctattagttctaccacacctatcggaaatcctggaatgt
ctcagtcggtcggtgaaacaagcagtggaaaacaacgagaaaatccaaggcaagtgcaag
ttggccattccacctcgtgagctttcagtcctgtccaagttgagtccatttgtgcaagac
gctaaacaatctgcaaccctgttggaagcattgataccctcgttaagtgacgcgcgaaag
gaggaagcggcgaacagaattctggcaaccgttaaaggactgttagctaatgtcgaatca
ccaatgacgtttgtcattcctctttgcaagcccttctcgtggattaaagaccgaagtaca
aggcagtgtttgtgtgaagtgtttttgaagctttccaatatcgatcccagcttctctttg
aaggcctctgaactactccgcatgataaactcttgggatgacaagcgactcgaggagcct
gattatgatacaagactcgctgggtttgctgaagtacgagcttgtcttcaacgaggtgaa
ttaaaacaggaggagattctggcaatccttaacaactgtatttacttcgttttgaacagt
actgacatgtctctgagagatagtggcggtagctctatgagttgtatcttgcgatatgtt
cttcagaagagtgcagaaaacaaagaagcgtttaatctcctcgtcatagagaatctgctt
ccagcatgcaagaaagccattgcttcgaaaaatgaggttgcgcggaacgaatttctgtct
ctgctgtccatgatggtgcgcgggtgtgaacacgagtcgtggtctgatctaactgttttg
ttgaacgatgatcccgagaaagatttttttgagaacatgaaacacatacagcttcatcgc
cgtgttcgagcgctgcgcctcctgcaattacattgccagaagcataccttcaaaaccaca
accctgacttcatatttgttgcctctggcaacacgttgcatatttgaaaacaaggatagc
caacttattagtgagggtatcaccaccattggagcaatatcagcgatccttccttggttc
cactactgtcatttgttgagacactatttgagattacttcccttggaaaagaatgctcaa
aaagtcattgtgagggtcgttgtgatcattttgaacaattttcactttgatctaagctcc
gtttctgatcaatccgaaagcttctcaccgatcgaaattcatgtagaaaaggacaacgtg
agccaaaacgcgactgtcgacaaggaaggaaaagaccctaatgttgcaagtgaaatcgaa
gctgacgcgaagaatgatgataaggaatcaagtaaaggagacgatcaaggtgatcttgac
gatgacggtgaagattatgctgctgaagaaaaaacaactgatgaggatccgttggatatt
tataaaacgatatcactttctattctgcctgagttgcagaagtacgccaccaaagagagg
acgtcggactcctttcatcgactgagtcggatgaaagctgaggatgaaaaggaaatattg
cgtgtgcccgttcttcttgctatcatcaagctcctgcaagccctacccgagcatgcacta
cacttacatctgccaggacttctcctgaaggcgtgtaacatattaaagagcaaaagtaac
gaggtacgtgttgcagcaagggaaaccctgacgaaaatcacgatctctcttggaatcaag
tatttgccttttattgtggagcaactccgcggtgttcttaggactggataccagcttcat
gtactcagtttcacgttgcacaggttgctagagaaattgagtagctctctcaatcctggt
gacctggatcctggtcttcaggacatagtggaggttcttgtagaagatctgttcggtgaa
gtagcgaaagagcgtgaggtcgagaagattgcgaacaagctacctgaggcaaagacctgc
aagagctgtgacacttttgagattctttcaagatttgtggaagcgcaatcattgaacaag
ttgattactcccttaaaggagattctagattccactaaaagtcagaaaacagctcggctt
gtcgaagaggttttgaggagaataagtgttggtctgcaatcaaaccagagcatgactgtg
cctttacagttgatctttattcatggacttgccagtgagaatatgacgcttctgaaacct
aaaccagtgaataacactgttgctccggaggtagctgacataagactccgccctgaaagt
tcgcttctacttccacccagccctaaacgcggtggaaacgtcccacagcccaatgaaaag
acaaaccatcacattttgatagagttcggccttcagatgctgtacttgttgttgaaacaa
ggtaaaatttccacttctaatgaggaacagctgcgaatgttggacccatttgttgagttg
cttactgactgtctggaatccaagcacaataagatggtgacggtagctgtgcgttgtgtt
tgccagttggtgaaattccctctgccttccttagcacgctttgttcctaagataggaaaa
caactcttccagttgctcaagatttatgccagggccggtgcaaaagttggcgagaattat
gagatggttctgtctgctttcaagggtatgacggtcattatccggaaccataaacatttc
aaagtggcggagaagcaactgcaagttctgttagggtttgtggaggaagatatccatgat
cacagcaagcaaggggctgcttttccacttctcaaggctatcctttctaggaaactgatt
gtccctgaaatccatgacgtcatggggaaggttggccagctgtcaatcaccagtagctcg
caaaacgttcagcttcagtgcagacagtgtttgcttttgtttcttctggactatcctctt
gggaaaaaactgcaaggatacctggagttttacgtatctcagctcggatatgaatatgag
aagggccggcagtcagctttagaaatgctaggatccatgttttcttcctttcctgaggaa
accgtcgctgagaatgctagtttcttttttataccgctgaccacccgtttggtgaatgac
gattcagctaattgccgtcaactggcaggttatacaatccaattgcttttgaagaagctt
gacgctgatcaaagaaacaagctattttctattacgcttttgtggttcaaagatgagaag
gttgctgttcagcgccttgcagcccaagtttggggcttgttcgttgaagttgaaggaaag
aatttcgacaggaagttgacgaacctactgcctattatatctgatgcgatagtcccagaa
cggtttgaaggggaggaatgtgttgacgataaagaagttgacagtaatggtcaaatcgcc
aaacgccccaaagatcatttgctattcaacgtgctctcgctgctagcaaaaatcatgaag
gaatgccaggttatcaagaatccaagtaggcaggaggaaatgacgaaaatttgggggtcc
gttgaagagcatttactccatccacatgtctgggtccggctggcttccagtcgactcctt
ggacttctcttcgctgcctggaaacctgaggaactggtgactaattttctggaaggaaag
acgtcaagaagttatcttcagcaggatttgccggcaaaggtaactaagctgtgcgaggtc
atttgtaggcagtttcgctcacaactattgaacagcgaattgggagaacagatggtaaag
aacttagttttcttggccaaaacgctgcagattctgtccagtgaaggttctccaatagct
gaaaacaaccgagaccgtcatgcctctaacgaaaatctcaccagtaaagaaggtcctctg
acactcaaagatcttttgagaaaattgaataaggaagcgactttggaagattctttagcc
acaaggcaaacacagaagaggaactgtgtgttgagactggtgtctgcagtcgccattaat
ttaggaagagatggcgttgaaccgttccttacagacattttaaagcctatccacagagaa
ctggagattccttcgtcattcaaagatcctgatttgaaaacgcttgcgctggaagcacta
gatctcatcaagggtcttgcgaaacgagatgccgtatctcaggcgtacgctatacttcaa
aaagcaacgataaagacacgcgaaacacgcagaaagaagaaagcactagaggcagtcgcg
gacccgttgatggctgctcgaaagaaagttaaaaagaatcaggccaaggaagcctcaaga
aaaagaaaactcgatcgtcttaggccagaacggagattgaaagcacctagaatgcaaaac
gcgtaa
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integrated database retrieval system
