Acropora millepora: 114957758
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Entry
114957758 CDS
T06134
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
amil
Acropora millepora
Pathway
amil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114957758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114957758
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114957758
mRNA degradation factors
5'-3' decay
Decapping complex
114957758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
DUF3234
Beta-prop_TEP1_2nd
Dsc3_C
PqqF-like_C_4
Motif
Other DBs
NCBI-GeneID:
114957758
NCBI-ProteinID:
XP_029191110
LinkDB
All DBs
Position
4:complement(2854627..2886595)
Genome browser
AA seq
1401 aa
AA seq
DB search
MDDSARGMASKILCDLLNISKTDSVSANSGSNNDDNKISNGVERPEMEDVDESISETAST
TSSLSPIRRGKIEQSSDVSTSDSEGVASRMSLEPVKQVLQMTGIDNEGSKSVYGSDVEII
THDSASSISATASSKIKFNSMVNYDWELKYYRGCLIAVSSKCIAYALRGRLGYVVRLLDP
ETASRILIKGFVGMISELAFSHKDSNTLACVDEGGNVYVWVIQDENGKLEYSVKLHIQRS
TDALCEHHRLVWTPYMPDVEENAESSADEGRPLAITHGNQVEVIDIDSLLESCGQSEVTV
EDVKQAEGYLEIKDGHTKPITEGALCPDGSVLATASEDGLIKFWQLSDKVECMHEFQPHG
GSQLSCMMFTDSQTSQNKDLPMWRFLITGADLNKEIKIWCTVTWSCLQTIRFSSPGSSSV
NSSFYKVSLDLSASYLVVSDIVKKVLYIFMFHQDFDEGHAHVTSVAEFLLTQPLLSFVIG
QVKLFKPKSHGEQNGGENCETRDDDEDIHQLLVELEDAGDQKGKKFGVQLQLFCIQTKAM
QELLVHFQPEPSVPPPTPSTLSSLTTVAGQSVIHDALSDLSGVETGTEASTDVEEHDEAT
DEPHPGQPKLMTPEAFKNSGSKMSTQPEAVSSSGSSVTLVSRLNTSQGSVDELLASSLSS
RVSDSTIRSSTSVTPQGCLHESGVRTPTSLPLPASPTITNASEPSTVPIPYFQSSPRVVA
AQNETEPEASLPDPLVPVTVTRTEAAPFSLMNENLRDRGSGSRGATPKIRSGSASPVNRD
ADIEVSVDDDAKDEGAEELPESQKPEAETQGELNERDRKSSSGSSTSESLRPLSARATGN
LINLDDNERGKGEDVQAGVQDVDELEERWGMNVEDDLVATGRESPESAHALPVGTPATSS
VHVGTRQLSALSSLVSTPVNTMDIAPQAAQGARMDGEVLASLGELLSLIKSQQQDIQELR
QQINLFQDAQKQNTTAVAREVQDVEERLAKRLENSLNDFSRDESQRLDKALREKHSGDKK
RHEQLQNSLSQSLTNSLSGKLEKAVKAEVKSVVLPAVQKVLSTVQEQLNTTLTQKLTATD
TVMKDSIGKLVRSKGVVDAIGGAAATALQGPIQVTYREAFQRDILPSFERACQSMFQQIN
DSFHKGTQQYLHQVTAALDGRRGEEKESLVPVLQRLEAQTSSFQAITEKMSSNILADFEV
MLQKQLSSSLEGLRGEIFSRLLSEVLTSVQDSVQKEMGLGLEGLRQQLSEIITSSDQSPI
QQASNPAKTQVVVSKLLESGRIGEAFQEALTASDLRIVVYVCETVDTDTVFSQTPCPLSQ
PVLLSLIQQLSVDLTVDTELKHKYIEEALMALDVTNEVTREHMPGVLEVLCQQLQSAIQE
SSGPRQRSLKMLQMAAKSLLR
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcgcaagaggaatggcttccaaaatactttgtgacctacttaatatttca
aaaacggatagcgtctccgcaaactcaggctcgaataatgatgacaataagataagcaat
ggcgtagaacgacctgaaatggaagacgtagatgagtcaataagtgaaacagcttctaca
acaagttcactctcacctataagaaggggaaagattgaacaaagttctgatgtatcaacc
tctgatagtgaaggtgttgcatcaagaatgtcccttgaaccggtgaagcaagtgcttcag
atgacaggtatagataatgaaggcagcaaatctgtatatggcagtgatgttgaaattatc
actcatgactcagcatcatcaataagtgctacagcaagtagtaagatcaagtttaactca
atggtaaattatgactgggaactcaagtattacagaggatgtcttatcgctgttagcagc
aaatgcattgcctatgcactcagaggtcgtttaggttatgtggtgagactattagatcct
gagactgcttcaaggattctaatcaagggctttgtaggcatgatcagtgagttggcattt
tcacacaaagattccaatacattggcatgtgttgatgaaggtggtaatgtttatgtttgg
gtcatccaagatgaaaatggaaaacttgaatactctgtaaaacttcacattcagcgttcg
actgatgcactatgtgagcaccacagactggtatggactccttatatgccagatgttgaa
gaaaatgctgagtcctcagctgatgaaggtcgtcccttggccattacacatggtaaccag
gtggaagtaatagatattgattcattgcttgaatcatgtgggcaatcagaggtcactgtt
gaagatgtaaaacaagcagagggatatttggaaatcaaagatggacacactaaaccaatc
acagagggggctttatgtcccgatgggtcagtattagcaacagccagtgaggatggtctt
atcaagttttggcagttgtctgacaaggttgagtgcatgcatgaatttcaacctcatggt
ggctctcagctgtcttgtatgatgtttaccgatagccaaacttcccagaataaagatctt
cccatgtggagatttttaatcactggagcagatctcaataaagaaataaaaatatggtgt
acagttacatggtcttgtcttcagacaataagattttcatctccagggtcaagttctgtg
aacagttctttctacaaagttagcctagatctgtcagcttcgtatttggtagtttcagat
attgtaaaaaaggttctttatatcttcatgtttcatcaagattttgatgagggacacgcc
catgttacatcagtggctgagtttctcctcactcaaccgcttcttagttttgttattggt
caagtcaagttgttcaaacctaaatcacacggtgaacaaaatggaggggaaaactgtgaa
acccgtgacgacgatgaagatatacaccaattgctggtagaattggaagatgcgggggac
cagaaaggaaagaaatttggtgttcagctgcagttattttgcattcaaactaaagcaatg
caggagctgcttgtgcactttcagcctgaaccttctgttcccccacccaccccttccact
ctgtcatcgctgacaactgttgctggccaatccgtcatacatgatgcactctctgacttg
agcggagtggagactggcacagaagccagcacagacgttgaagagcacgatgaagcaaca
gatgagcctcacccaggtcagccgaagctcatgactccagaggctttcaagaactccggg
tctaaaatgtccacccagcctgaggctgtaagcagtagcggaagcagtgttactttggtc
tccagactgaacacttctcaaggatcggtggatgagcttcttgcctcatctctgtcatct
cgcgtttccgatagcactatcaggtcaagtacttcagtgacacctcaaggttgcttacat
gaaagtggtgttcgtacacccacgtcgttaccgcttcctgcctcaccaactatcactaac
gcttcagagcctagcaccgtaccaattccatatttccagtctagtcctcgtgttgtagct
gcgcagaatgagactgaacctgaagcgtcgctacccgatcctctggttcctgttacagtg
accaggacagaagcggctcctttcagtttaatgaatgaaaatttacgcgatagagggagt
ggttcgaggggagccacaccaaagatcagaagtggatcagcaagccctgtcaacagagat
gcggatatcgaggtttcagtcgatgacgatgcaaaggatgaaggagcggaagagttaccc
gaatctcagaaacccgaggctgaaacgcaaggagaattaaatgaaagagatagaaaatcc
agctctggctccagcacaagtgaaagcttgaggccactctctgctcgtgcgactggaaat
ctgatcaacttggatgataacgagagaggaaaaggtgaggatgtccaagcaggcgttcaa
gatgtggacgaacttgaagagcgctggggaatgaatgttgaggatgatttggtcgcaacc
ggacgggaaagtccagagtcggcacacgcgcttcctgttggtacaccagcaacttccagt
gttcatgttggaacaaggcagctctctgctctttcaagtttggtttccactcctgtaaat
acgatggacattgccccacaggcagcccaaggggctcgtatggacggtgaggttttggca
tctcttggagagttattgagtttaatcaagtcgcagcaacaagacatccaggaacttcgc
caacaaatcaacttgtttcaagacgcacagaaacagaacacaacagccgtggctcgtgag
gttcaagatgttgaagaaagattggccaaaaggctagaaaacagtctgaatgacttttcc
agagatgagtctcaacgtctagataaagcattacgcgaaaaacattcaggggataagaag
cggcacgagcaactccagaacagcttgtcacaaagcctaacaaactccctgtcggggaaa
cttgaaaaagcagtgaaagctgaagtgaagagtgtcgtactaccagcagtgcagaaagtc
ttgagtactgtgcaggaacagctcaatacgactctgacacagaaattgacggctacagat
acagttatgaaggacagtattggtaaactggtgaggagcaagggtgtggtggatgcaata
ggaggtgcagcagcaactgcattgcaggggcccattcaggtgacttatcgtgaagcattt
cagcgtgacatattgccatcctttgagagagcttgtcagagtatgttccaacagatcaat
gattcattccataaaggaacgcagcaatatcttcatcaggtcactgctgcattggatggt
cgtagaggagaagagaaagagtctttggttccagtattacagcggctcgaggcacagacg
agttcattccaagcaataacggagaaaatgtcctcaaacattttggcagacttcgaagtt
atgttgcagaagcaattgtcatcctccttggaaggtttacgtggagaaatcttctcacgg
ctcttgtcagaggtgttgacatctgtccaggactctgtccaaaaagaaatgggattgggt
ttggagggtctacgtcaacagctcagtgaaataataacctcttctgatcaaagtcccatc
caacaagcttcgaatccggccaagacgcaggtggttgtttcgaagcttcttgaatctgga
cgaattggtgaagccttccaggaggccttgactgcatcagacttgcgtatcgtggtgtat
gtctgtgaaactgtagacactgacacggtgttttctcagacgccttgtccgttatcacaa
cctgttttactttctctaattcaacaactgtcagtggatctcactgttgatacagagctc
aagcacaagtatattgaggaagcactgatggcattggacgtaaccaatgaagtaactagg
gaacacatgccaggagtattggaggtgctatgtcagcagcttcagtctgccattcaagaa
tcatctgggccgaggcaacgatccctcaagatgctacaaatggctgccaagtctctccta
agatag
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integrated database retrieval system
