Acropora millepora: 114958275
Help
Entry
114958275 CDS
T06134
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amil04040
]
114958275
Ion channels [BR:
amil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114958275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
Ion_trans
Motif
Other DBs
NCBI-GeneID:
114958275
NCBI-ProteinID:
XP_029191832
LinkDB
All DBs
Position
3:17006308..17030561
Genome browser
AA seq
1132 aa
AA seq
DB search
MGNSLSVARRQRNCEEKSSSREPDLQRMSNKLVADSDYIQLDDISDNTEMSSLLSARNSR
RVSDNSTPENSLQQSIDETVERNPCKRIGLSQACIDGWLCQVEKLLKADPAACNELDKDG
LAPLHHAARGSHLQIIDCLLNAGADIDIVASSQAGFMTPLICASKFDAHEACRLLIQRGA
EVFSRCCIGQSPLHYAARKGNLRVIEVLLTEGKVPVNLEDNDKATPLHTAALVGQTQVIH
KLIYNGGDLSLRDNDGFTPFHLAAREGHLQAFKDMLNNAKKVGLSLSTLLNSPDNYGEVC
LHMAVKNGHTEIVELCLDSGADMSKAQADYSTPIHLACCQGNLDITKMLVKRGAKIECED
GNGLTPLLRASLEGHVPIIEYLLEQGAQLYPTTETCTPSPIMCAVKRSQHAAVKYFLARG
FPLDKYTDAKWRTPLHVAVACADLQTVDLLLERGGDSLLEKRDQYGKTAIHYAAATCNVD
KLNRLIYVGADVRAKDNDEKIALHFAAENGVICVVKALLSACPESVNDIDYASRTPLHYA
ARKGRVEACTHLLSNGAAVDYRDDDRHTPLFHAAIVGCGVTSGVLLQYNADINALDKNRK
SPIIYAAYLGKMCALRRLIKDGADVTVVASGGYNCLDAAIMSGKKEICMEIIKHDKWREV
LSNRKLEGVTPMRRLIEKYPQVAQTVMDKCIEHSSHLDTDQNYSITYDFSFIYPKVGEDI
DNKKERYCGAKTMLDCHREELLFHPLTRQIVRMKWRKIGLTVFFLGALLYALFLSVFSHY
LFCCSCSFQSNTAMCINEASIHCSKDLMVPQEYIIAIFCFINLLFEGYQLYNERWMYLDV
SNFLEVSTYVTAIATVLPLNGGITGESDVQWATGVISLLLAYGVMLVQLQLLFCSGIYVT
MLIEVLKSVFRVIVVFSVLFLAYGLIFYLLLGDELSYQNTYMSTLKVFDMMAGGIEFNHY
FVEKNIPMPDLARFIVFTFIIVMSLSFMNLLIGLAVGDIEAVQKNAELKRLKTQIEAIHQ
FEEKLPTRCLEKLYKSHLIMKPNSQSNSFLRKLTWYLGLVDYGHWKMIVDTQINEEDKIE
SLKGQLSENKDSIISLRTELRSQRTILENISSHLGTRPISNQQISLLHELLD
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgggaaactcgttgtcggtcgctcgtcgacaacgaaattgtgaggaaaagtcgtcttca
cgagaaccagatttgcaaaggatgtcgaacaaattggttgctgactcggactacattcaa
ctggatgacatttcagataacactgaaatgtccagcttattgagtgcaagaaattcgcgt
cgagtttcggataattccacgccggaaaactcacttcaacagagtatcgatgagacagtg
gagaggaatccttgcaagcgaatagggctttctcaggcatgcatagatggctggctgtgt
caagtagagaaattgcttaaagcggaccctgccgcgtgtaacgagctcgacaaagatggg
ctcgctccgcttcatcatgcagcaagaggaagccatcttcaaataattgactgcttgctt
aacgctggagcagatattgatattgtggcttcgagccaagctggttttatgacaccgttg
atctgcgcaagtaaattcgatgcgcacgaagcttgccgccttctgatccaacgaggagcc
gaagtattcagcagatgctgcattggccaatcaccgctgcactatgcagctcgtaaagga
aatcttcgagttatagaggtcttattaactgaggggaaagttcctgtaaaccttgaagac
aacgacaaggctacacctctgcacactgcagccctggttggacagacacaagttattcat
aagctgatatataatggaggggatttgtctcttcgggataatgacggtttcacgccattt
catctggctgccagagaaggccatttgcaagcgtttaaggatatgttgaacaacgctaaa
aaagttggattatcactgtctacgttattgaacagtccagacaactatggagaagtgtgt
ttgcatatggcagtcaaaaatggacatacagagatcgtggaactttgcctggattcaggg
gctgacatgagcaaggcacaggcggattactcgactccaattcacttggcctgctgccag
ggcaacttggacatcacgaaaatgttagtgaaacgaggagcgaagatcgagtgcgaggat
ggcaatggtttgacaccgttactgagagcctcgcttgaaggacatgtcccaattattgaa
tatcttcttgagcagggagcgcagctgtacccaaccaccgagacttgtactccctccccg
atcatgtgtgcggttaaacggagccaacacgccgccgttaaatatttccttgctcgtggt
tttccattggacaagtatacggacgcaaaatggcgaacaccgcttcatgtggcggtggct
tgcgctgaccttcagacagtggacttgcttttagagaggggaggagatagtctattggag
aagagagaccaatatgggaaaactgcaattcattacgctgcagctacttgtaatgtcgat
aaactgaaccgtctaatttacgtcggagcagatgtcagagccaaagacaacgacgaaaag
attgctcttcattttgctgcagaaaatggtgtcatatgtgttgtgaaagcgctgttgagt
gcatgcccagaatctgttaacgatattgattatgcctctcgcactcctctccactatgca
gcaagaaagggaagagtggaggcctgtacgcatcttttgtcaaacggtgcagcggtggac
tacagagatgatgatcgtcacaccccgttatttcacgctgccatcgttgggtgtggcgtg
acaagtggcgtattgcttcaatacaacgctgatatcaacgctcttgacaagaacagaaaa
tctcctataatatatgcagcctatttgggtaaaatgtgcgctttaagaagactcatcaag
gatggagcggatgttacagtagtagcatcgggtggctacaactgcttagacgcggcaatc
atgtctggaaagaaagaaatttgcatggagatcatcaaacacgacaagtggcgggaagtt
ctaagcaacagaaaattagaaggagtgactccaatgcgcaggctcattgaaaaatatccg
caagttgcccaaaccgtgatggacaaatgtatcgagcattcgtctcatctggacacagat
cagaattactcgatcacgtacgacttcagtttcatttatccaaaagtcggggaggatata
gataacaagaaagagcgatattgtggagccaagactatgttggattgccacagggaggag
cttctgtttcatcctctcacgagacagatcgtacgaatgaaatggcgaaaaattggtctg
actgtgtttttcttgggagctctattatacgctttattcctgagcgtgttctcacactat
ctcttctgttgttcctgctccttccaatccaatacagcaatgtgcatcaatgaggccagc
attcattgcagcaaagatctgatggtaccacaagaatacattatagccattttctgtttt
ataaaccttctctttgaaggttatcaactgtataatgagagatggatgtatcttgacgtg
agtaatttcttggaagtttccacctacgtgacagcgattgccacagtcttgccgctaaac
ggaggaatcaccggtgaaagtgatgtacagtgggccaccggagtgatttctctattgtta
gcctatggggttatgctggtccagctgcaactacttttctgttcaggcatttatgtgaca
atgctgattgaagtcctaaaatcagtttttagggtcattgtcgtattctccgtccttttt
cttgcgtatggattgatattttatctcctcttgggagacgagttatcctatcaaaacact
tacatgtcgacgcttaaggtctttgatatgatggcgggaggaatcgagttcaatcattac
tttgtggagaaaaatatcccaatgccagatcttgcgcggtttatcgtctttaccttcata
attgtgatgtccctctccttcatgaatctgttgattggtttggcagtaggggatatagaa
gccgtgcaaaaaaatgcagagttaaagagactgaaaacccagatcgaggctattcatcaa
tttgaagagaagttgcctacccgctgtctggaaaaactgtacaagtctcacttgatcatg
aagccaaactcccaatcaaattccttcctgaggaagctaacgtggtatctgggtttggtg
gactatggacactggaaaatgattgttgatactcaaatcaacgaagaagataagatagaa
tctcttaaaggacaactttccgagaataaggacagtatcatatcgctgaggacggagctg
cgttcccaaaggacgatactcgagaatatctcaagtcatcttggaacaaggccgatatcc
aaccagcaaataagccttctgcacgagctgttagattga
DBGET
integrated database retrieval system
