Acropora millepora: 114959372
Help
Entry
114959372 CDS
T06134
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
amil
Acropora millepora
Pathway
amil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114959372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114959372
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
114959372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_2
TPR_17
TPR_14
TPR_1
TPR_CcmH_CycH
TPR_19
TPR_8
TPR_11
TPR_12
ARM_TT21_C
TPR_9
ANAPC3
TPR_COPA_B
DUF7017
Motif
Other DBs
NCBI-GeneID:
114959372
NCBI-ProteinID:
XP_044163899
LinkDB
All DBs
Position
1:complement(35672223..35705136)
Genome browser
AA seq
1646 aa
AA seq
DB search
MAASAKETKALLKNARECIKNKEYKESLKHCKGVLKLDKTNYTALVFIGKCAAELDQADQ
SLMAYRKAIESDETQPLAWQGLAALCEKEDNSKLKSELLEVYPKLLQFHKGDKSKWVEVA
RKLAILNESQGNAFQAVAGWEEIVALTEDKTEQFNIWSRVIQILEKVQSPEKEERNRKLK
EIYKKVVTCEGLPEELNNQLERHFECYVKLLSKLLASENQELLKEQPTETIDTAKSMIQL
FPRSKFALEFLAKDFLLSLVNAPTMEMTELFQKLCHMYPESGIGAIGLGSVILHQNEFVV
ARELLQKGLQIFSDCPYGWLSLCRAQRSLHNYQAAAKAASKGISCVSCSSANVRKAVKRK
LSFSRADALVKQSPEAALLARDVYEELLEDADVQEEVEILTGLGQAYLTLGDVSQATQFC
SKALGIDASFASALALQGEISMHEGLFDDAELRFLEALEKGEECALYHFLLGKLYWKMNG
NLRADKKKCLASFLKAAKLDPYYSPSFLYLGHYYLKVLKDMSKACRCYQKAFDLDPNSDD
AGTALGDSLTELGDEVAALNLYKNITAMSSPGKGKWAWLRLGLFHLKHNESTEAITCFQS
ALRADPKDRHCWECLGEAYMSRGSFTAAMKAFTKATELDPSSLYCLYQLAAIKQLLSVHG
EAIKEYKMILEMQPDYVPALKGLGETYLNQARSAIEQDLNGKAVDCVLEAITVLAQAIKH
KPGLSCLWKLLGDCCTIIHPIANEAFRGSIPDTLRKFVRGEPEEFVQKQDMLALGSSAYG
KALKLQPECGSLWGDLGFNCFQQAKLLEGSDKEKMAHRSTQALKKGLSLQPSNHKLWNTL
GVVAASEEVNNPELSQHCFIMSIKTEPNNVIAWTNLGVLYLKHGKIELAHEAFKNSQALD
PSYGAAWTGQATIAEIIASEEAMDLFRHTTELGSHREGNIGYAHWVCSSLLPDKSPENHV
ILKGHPVPTLSHLHPEYRKAVLQSSTALSKYTDCIRNDAGAYNMYGLILENQKLFLQAEQ
AFTSAIKLLQQSEKEIDRQHLNSVIINHARVLCALGRYKESAARYQAAKPLNEFHDVCGL
ALSLFMAGQLKDSFQAYEQAYQQATTDGDRSCVLAALGMLGYALSDMDGAKTMLFKSSQL
QPACHQGLMALCTLGLVSGDATLAGAALGELMRANNGNEALTGHICYLYSRFYALQGNQK
LGRSHIMKAIHSNPSSSVLWSHLASYLLQACPDELEAAACCSESSARLGGSHSVEHNPAI
HPAGIVGSGALRNHDKEAARISATIRTRAGLIASQKAVHAHPDHLSSWSVLAASVTATSI
ARNRERLERERGILDTRIAQFVQMKASTETDALKRRSENQLPALVNWRISHLESAQSWSV
IHHGHGLLFSKMLKEAADHVDQALTVYSSVPHVSTQLHFLKAQVLLASEQPVETGLNMLQ
ASLLSSPVHSPNAWQVLAEVQANQGSAKAAELCYRRCLQAGMDGKSQSWRVVPLIRLALL
ALRVAQKESPDRDRFLNLALEASSEVVKLKTDFIVAYLIQGIVYFLQNNSGESRRVLERV
LDSTWSGLPVAQYWLLLLYLVKKDLSAAQDLLTQARFRGNTRLDLLYYRFTQNGEIPAEF
RLRTIEKCVHINPSESVFWNSLKPTA
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgcgaaagaaacgaaggctttgctaaaaaatgcaagggagtgcatcaaa
aataaggaatataaggaatctctcaagcactgcaagggggttttgaagcttgataaaaca
aattacactgcactggtgttcattggaaaatgtgctgcagaattagaccaagcagatcaa
tctcttatggcatacaggaaggctattgaatcagatgaaacgcagcctcttgcttggcag
ggcttagctgctttgtgtgaaaaggaggataactcaaaattaaaatctgaactcctcgaa
gtttaccccaaattactacagtttcataaaggggacaaatccaagtgggtggaagtggca
aggaaacttgctatattgaatgaaagtcagggtaatgcatttcaggctgtagcaggctgg
gaagagattgttgcattaactgaggacaaaacagagcaatttaatatctggagtagagtt
atacagatccttgaaaaggttcaatcacctgagaaagaagaaagaaacagaaagttgaag
gagatatacaagaaagttgtcacatgtgaggggttgcctgaggagttaaacaaccaacta
gaaagacactttgaatgttatgtaaaactcttgtcaaaacttctggcttctgaaaatcaa
gaattgctcaaggagcaaccaactgagactattgatacagctaaatccatgattcagtta
tttccgaggtctaaatttgccttggagttcctagcaaaagacttccttctttccctagtc
aatgcacccacaatggagatgactgaattattccaaaagctgtgtcacatgtatccggag
tctggcattggtgcaattggtcttggcagtgtcatactccatcagaatgaatttgtagtt
gccagggaattactgcagaaaggtcttcagatcttcagtgactgtccctatggttggttg
tcactttgcagggctcaaagaagccttcacaactatcaagcagcagcaaaagctgcaagc
aaaggtatcagctgtgtatcttgttcatctgcaaatgtacgaaaagcagtaaagagaaaa
ctaagcttttctagagctgatgctctggtgaaacaaagcccagaggcagcattactggca
agagacgtatatgaagagctactagaagatgcagatgtgcaagaggaagtagaaattctc
actggccttgggcaggcatatcttactctaggggatgtttctcaggcaacacaattttgc
tcaaaagccttgggtattgatgcaagttttgccagtgctcttgcattacagggagaaata
agcatgcatgaaggactttttgatgatgcagagttaaggtttttggaagcgttagaaaag
ggtgaagagtgcgctctttaccactttctccttggcaaattatactggaaaatgaacgga
aatcttcgagcagacaagaagaaatgcctggcttcatttctgaaggccgcaaagttggac
ccttattactcgccatcgtttctttatttaggacactactatctcaaagtgttgaaggat
atgagtaaagcctgtagatgttatcagaaagcgtttgatcttgatccaaattcagacgat
gctggaacagctttaggagattctctgacggaacttggagacgaggttgcagcgcttaac
ttgtacaagaacataacagccatgtcatcccctggaaaggggaaatgggcgtggctgcgg
cttggattatttcacttgaaacacaacgagagcacagaagcaattacttgttttcagagt
gcattgagagccgatcctaaagatagacattgttgggaatgtcttggtgaggcatacatg
agccgtggaagcttcacagctgcaatgaaggcattcacaaaagccactgaacttgatcca
tcgtcgttatattgcctgtatcagttggctgccattaaacaactgttgagcgttcacgga
gaagccatcaaggagtacaagatgattctggaaatgcagcctgactatgtcccagctctc
aaaggcctgggagagacgtatctaaaccaggcacgctcagccatagagcaagaccttaat
ggcaaagcagtggactgcgtacttgaggccataactgttttggcacaagcgattaaacac
aaacctgggctttcttgtctttggaaacttcttggtgactgttgcacgattatccaccca
attgcgaatgaagccttcagagggtccattccagacacccttaggaagtttgtccgtgga
gaacccgaagaatttgtgcaaaagcaggatatgctagctttgggatcaagcgcttatgga
aaggcgctgaagctgcaaccagaatgtggatctttgtggggagatctgggattcaactgt
tttcaacaagctaagcttctggagggaagtgacaaagagaaaatggctcacagatctact
caggcacttaagaaaggtctttcgctgcagccatccaatcacaaattgtggaacaccctt
ggagtggtggccgcctctgaagaagttaacaatcccgaactcagtcagcactgttttatc
atgtccattaaaacggagcccaataatgtaatcgcttggacaaatctgggagttctttac
ttaaagcatggaaaaatagagcttgctcacgaggcctttaaaaattctcaagcgctagat
ccatcgtatggtgcagcttggactggacaggctaccattgctgagattatagcaagtgaa
gaagccatggacctgtttcgacacacgacagagctgggctctcaccgagagggaaacatc
ggctacgctcattgggtttgttccagtctgctaccggacaaatcccctgagaatcacgtg
atactgaaagggcatccagttccaactctctctcatcttcatccggaatatcgcaaagct
gtgctgcaatcttcaactgccctcagcaaatatacagattgcataagaaacgacgcaggt
gcctacaatatgtatggcttgatactggaaaatcagaagctgttcctgcaggcagaacaa
gcttttacgagtgctataaaattgcttcaacaaagtgagaaggagattgatcgacagcat
ttgaatagtgtgattattaatcacgcgagagttctttgtgcactgggtcgctataaggaa
tctgctgctcgttatcaagctgcgaaaccactgaacgaattccatgatgtgtgcggtctt
gcgctatcattgttcatggctggccaattaaaagacagctttcaagcctatgaacaagcc
tatcagcaggctacaaccgacggtgacagatcttgtgttctagcagcactgggcatgctg
ggatatgcacttagtgacatggatggagctaaaacgatgctttttaaaagttcacaatta
cagcctgcttgtcatcaggggctaatggccctctgtactcttggactggtcagcggggac
gctacacttgctggggctgctctcggcgaactgatgagagcaaacaatgggaacgaagcg
ctgactgggcatatctgttatctgtattctcggttctacgcactacagggaaatcagaaa
cttgggcgaagtcacatcatgaaagcgattcacagcaatccaagtagcagtgtattgtgg
agtcacttggcttcctatctcctgcaagcctgccctgatgagctggaggctgcggcttgt
tgctcggaatcttctgcaagacttggaggtagccactctgtcgagcacaatcccgcaatc
caccctgctggtatcgtaggctcaggagctttacgtaaccatgacaaggaagcggccagg
atcagtgcaacaatcagaactcgtgcaggtcttatagcttcccagaaggctgtgcacgcg
caccctgatcatctttcaagctggtcagttcttgcagcttcggtgacagccaccagcata
gcgagaaaccgtgagagactggaaagagagcgtggcattctcgatactaggattgcacag
tttgttcagatgaaagcttccacagaaactgacgccttgaagcgtcgcagtgagaatcag
ctaccagcgcttgtaaactggcggatcagtcatctggagtctgctcaatcttggtccgtc
attcatcatggccacggcctgttgttctctaaaatgctcaaggaggcagctgaccatgtc
gatcaggctttgactgtgtacagctctgttcctcatgtctccactcagctccatttcttg
aaggcgcaagtattattggccagcgaacagcccgtggaaactggactcaatatgttgcag
gcgtccctgctttcgagcccagtccattcgccgaatgcctggcaggttttagctgaagtg
caagccaatcagggatcagctaaagcagcggagctttgttataggcggtgtctgcaggca
ggaatggatgggaagtcacaaagctggcgagttgttccccttatacgactggccctgttg
gctcttcgagtagcacagaaagagtccccggatcgagaccgctttctcaaccttgctttg
gaagcctccagtgaggtggtaaagttgaaaacagactttatcgtggcttatctcattcaa
gggattgtttatttcctgcaaaataactctggcgagtcaagaagagtccttgaacgtgtt
ttagactcaacatggagtgggcttcctgtggctcaatactggcttctcttgctttatctg
gtgaaaaaggatctttctgctgcacaggaccttttgactcaagcaaggtttagaggaaat
actcgcttggatttgttatattatcgatttacccagaatggagaaattcccgccgaattt
agactgcgtacaatcgaaaagtgcgtccacattaatccgtctgaaagtgtgttttggaat
tcattaaagcctactgcttag
DBGET
integrated database retrieval system
