Acropora millepora: 114961236
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Entry
114961236 CDS
T06134
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A-like isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amil03021
]
114961236
Transcription machinery [BR:
amil03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
114961236
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
TPR_14
TPR_19
Motif
Other DBs
NCBI-GeneID:
114961236
NCBI-ProteinID:
XP_029195701
LinkDB
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Position
9:406756..410469
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AA seq
450 aa
AA seq
DB search
MAAVRSFWLSNKQESKSRFFKSCIFQQMWREHTLPQTLGLESTTIQQKHLSYVARCLLNS
LLNHQFDDALQCMVALCGACLRTPEMFWRTGCEVMSNNTRSYSHLSQFIKNMFVICGPYR
TELLLDYAMYLVQYNSDITEANELLTTKLSDKSLQSSVLLKAYAGLFAYLSWKKSKKQLD
KKQLDNEEATVYGQDAQNSAASNLKRQMDFHAKQALALFDNSVEHKGNWDIFVTKQVEIL
DYYNRSEEARKILEQYMEKNPENPNAYRYLYYFLKSNCTNAEELCTVLGGLLQIDPTSDL
DEEYVELRRQQKEQPKGLLDALASLFLKLDHAACQRCEKTWKLFADTLKVYLTTGHDKKG
LDELWHKRLDWWPRFHFRPDQVPDRASASELEWQLAQHKAEVARLFLGKENPFSKAVQSQ
DKKVNSPFKRKRKADSLLHSPKKKIASLDK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgcggagcttttggttgagcaacaaacaagaaagtaaatctcgctttttc
aagtcgtgtatcttccaacaaatgtggcgtgagcatacattacctcagacattaggtttg
gaaagcacaaccattcagcagaagcatttgtcttatgttgcaaggtgtctgttaaacagt
ttgttgaatcaccaatttgacgacgctctacagtgtatggttgctttgtgtggagcttgc
ctaagaacacctgagatgttttggaggacaggttgtgaggtcatgagtaacaatactaga
agttactctcacttgagccagtttataaagaatatgtttgtaatttgcggtccatatcga
acagaactcttgttggattatgccatgtaccttgtgcagtacaactctgacataacagaa
gccaatgagttacttacaaccaagctctctgataaatctttgcagtccagtgttctttta
aaagcttatgcaggactctttgcttatttatcatggaagaaaagcaagaaacaacttgat
aaaaaacaactggacaatgaagaagctactgtgtatggtcaagatgcgcaaaattcagct
gcatcaaatttaaagaggcaaatggattttcatgcaaagcaagcattagctttgtttgat
aactctgtggaacacaagggaaactgggacatttttgtaacaaaacaagttgagatcttg
gattattataacagatcagaggaagccaggaaaatcttggagcaatacatggagaaaaat
cctgaaaatccgaatgcatacaggtatttgtattattttctcaagagcaattgcaccaat
gcagaggagctgtgcacagtccttgggggtttactgcagattgacccaacaagtgacttg
gatgaagaatatgttgaacttagaaggcaacagaaagaacaaccaaaaggtcttcttgat
gctctggcatcactcttcctcaagcttgatcatgctgcttgccaaagatgtgagaaaacc
tggaaactatttgcagacactcttaaggtgtatcttactacaggacatgacaagaaaggc
ttggatgagctctggcacaagcgacttgattggtggccacggtttcatttccgtcctgat
caagttccagacagggcttctgcctctgaacttgagtggcagctggctcaacataaggct
gaggttgcaagattgtttcttggcaaagaaaacccattctctaaagctgttcaaagtcaa
gacaagaaggtgaattcaccgttcaaaaggaagagaaaagctgactcattactccactca
ccaaagaaaaaaattgcaagccttgataagtga
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