Acropora millepora: 114961333
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Entry
114961333 CDS
T06134
Name
(RefSeq) nucleoporin NDC1-like isoform X1
KO
K14315
nucleoporin NDC1
Organism
amil
Acropora millepora
Pathway
amil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114961333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114961333
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114961333
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
114961333
NCBI-ProteinID:
XP_029195826
LinkDB
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Position
14:complement(4253537..4272480)
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AA seq
646 aa
AA seq
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MMPSDSPRPPRSEVAKLKWFTEGEYSWRTGATVVWLVMILPFAVFINSVAVSIDVFHPIS
WLNGCIMLLFNMSFWSTVCIFVCLCIVTQLSYAKFNTVKDVVHHSRISAILFPLHPARMF
HILLFVSSGAVAAYNVFGIWSDEIFYFTRLSEESETFCLNEELVFVVLFGAWLGLYSSVD
YFTKKGFHFAFPSVLQPKFFLVKLSIGPCFKQSILTCLKATRWFYVLYYLFGNVPRDAFL
SIAEVPLDSGVPARNTISGLLDLSLFWSVVTTGSLILFLWTFGCKLLVIFYTQRYTFPVE
SSFSQEQDQRLCVVIKNSTVPLLKFLAMFDLCHLSQFSSTRRKQIFSLSQPSGRPSNWAD
VSTECLHLIDSLTSRLLSAVSLQAHVQQSSLDAKQIGLSRNGNGYSNGHANGHANGNTVQ
AQSPSLYSSPLLSPVNATDRQTILSPPGKVQLWSESNGNAVKIPAPAPAQQTNVFIRLRT
KANEKVDNFVWRLNQVPHNIACRLKERPVIGFLFDETPEARTKAIFADCQLHIWAVEALS
RLVAASYTEDTYGVVQKSLPDIFISLVSLLQALDKHSKLSLALTSKPAIQARPPRPQGKD
SLRYQLRTTLVSAIYRITNIFHEHLRNIPMAVEHQKKLQSFLEFKE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgatgccatcagattctcctagaccaccacgttcagaggtggcaaaattgaagtggttc
accgaaggggagtattcatggagaactggagctactgtggtttggctagtgatgatcctt
ccatttgctgtatttataaattccgtagcagtgtccattgatgtttttcaccctatcagc
tggctgaatggatgcataatgttattgttcaacatgtcattctggtccaccgtttgtatt
tttgtgtgtctttgcatagtaacgcagctgtcttatgctaaatttaacacagtgaaggat
gtggttcatcattcccgcatctcggcaatcttgtttcctcttcaccctgcaaggatgttt
cacattttgcttttcgtgtccagtggagctgttgcagcttacaatgtttttggaatttgg
tctgatgaaatattctatttcactagactcagtgaagagtcggaaacattttgccttaat
gaagagttagtgtttgttgtcctctttggagcttggctgggattgtattccagcgtggat
tatttcacaaagaaaggttttcattttgcatttccaagtgtcctgcaacctaagtttttt
ctggtcaagctgtccattggaccttgcttcaaacagagcattttgacttgtcttaaggca
acgagatggttttatgtcctttattatctatttggtaacgttccaagggatgctttcctt
agcattgcggaagttccgcttgacagtggtgttcctgcacgtaacacaatctcggggttg
ctagacctttcactgttctggagtgtcgtaacaacagggtctctaattctatttctgtgg
acatttggatgcaagctcctggttatcttctacacacagcgatacacatttccagtggag
tcttcttttagccaggaacaagaccaacgactttgtgtggtgatcaaaaacagcacagtc
ccacttttaaagtttcttgcgatgtttgatttgtgccacttgtcgcagttcagcagcaca
agaagaaagcagatatttagtttgagccaacccagtggtcgaccgtcgaactgggcagat
gtgtcgacggaatgtcttcatctcattgattctctcacaagtaggctgttgtcagcggta
tcgctacaagcgcatgtgcaacaatcatcactggatgctaaacaaattggtttgtcacgc
aatggtaatggatacagtaatggacacgccaatggccatgcaaatgggaatacagttcaa
gcacaaagtccttctttgtattcaagtccccttctgtcgcctgtgaatgcaactgatcgc
caaacaatactgtcacctccaggaaaagtacagctctggtcagagagcaatggaaatgca
gtgaaaatcccagccccagcgcccgctcaacaaacaaatgtattcattcgtttgagaacg
aaggcaaatgagaaggtggataactttgtttggaggctgaaccaagttccacacaatatt
gcttgtcgtttgaaggaaagaccagtgatcgggtttctctttgatgagactccagaagct
cgaacaaaagctatttttgccgactgtcaacttcatatttgggcagtagaagctctctcg
agacttgtggcagcttcatataccgaagacacgtacggagttgttcaaaagagtcttcct
gatatctttatttccctcgtgagtttacttcaggccttagacaaacattccaagctttcg
ctggctttgacgtcaaagccagctattcaggccaggcctccccgaccacaaggcaaagat
agtctgcgttatcaactgagaacaacgttagtgtctgccatctataggataaccaacatt
ttccacgaacacttgcggaacattcccatggccgttgaacatcagaagaaactacagtct
ttcctggaatttaaagaatag
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