Acropora millepora: 114961970
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Entry
114961970 CDS
T06134
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
amil
Acropora millepora
Pathway
amil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114961970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amil03400
]
114961970
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114961970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
Imm41
IL34
AAA_27
DUF6762
Motif
Other DBs
NCBI-GeneID:
114961970
NCBI-ProteinID:
XP_029196703
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All DBs
Position
6:complement(18797799..18819793)
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AA seq
929 aa
AA seq
DB search
MAVQPCQQFSLDGAAEQGFLAFYRSLPEKPETTFRVFDRSDYYTVHGPDALFAAKEVFKT
TSVVKHLGSGDKKVPSVILSKMNFESTVRDLLLVRQYRVEMYRAASKGSKNTSAWELVAK
ASPGNLQQFEDILFGNNDMSVSTVVMSIKLGTDNGQRLVGASYADPAARKLGVCEFVDND
QFSNLEALLVQLGPKECLLPQHDTSPDSTKVLEVIQRSNALVTDRKKAEFSNKDIVQDLN
RLLKMGASGNSATLPEMDLTQATAALAALIKYLELLSDETNFGQFHLSTFDLSQFMKLDS
AAVRALNLLPNPLDGGNKSMCLVGLLNKCKTAQGQRLLAQWVKQPLMDKSKIEERLDIVE
VFFEDTELRQTIQEELRKVPDFSRLAKKFQRQKATLQDCVRVYQALHRLPTFNGVLAAYQ
GHHHELIRDCFTSPLQDLVQDFEKFTELVETTVDLDQVENHEYLIKASFDEGLQECREKM
DEILEQIPIELNKAARDMALEAGKSIKLESNNQYGYFFRITKKEEKALRGNKHYTTIDTR
KDGIRFNNSALRQLNEQFQALKETYNEVQSKLANEVIKVAGGYSEPMQMLSDIIANIDAL
ISFAHVSANAPVPYIRPKMTPKGEGHITLQMARHPCLEVQDDVAFIANDITLERGQNEFL
IITGPNMGGKSTYIRQTGVIVLMAQLGCFVPCSSAEIAITDSILARVGSGDSQLKGVSTF
MSEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISQNIATKIHCFCLFATHFH
ELTSLSDEVPTVTNLHVTAMTSSGTLTLLYKVKPGVCDQSFGIHVAELAHFPKSVIEFAK
QKAAELEDFQGNTAALGEGIVDPDTGTSPAKRRRLIKQDGEEIIKDFLTQVAKLSVETMT
EEQLAHEMSILKDKMLARKDPYIQDLLAN
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccagccctgtcaacagttttctttagatggtgcagcagaacaaggtttcctg
gctttttatcgatctttacccgagaaaccagagaccacttttcgtgtttttgatcgctcg
gactattacactgtccatggaccagatgcattgtttgctgctaaagaggtttttaagacg
acaagtgttgtgaaacatcttggttcaggagacaagaaagtgccatctgttattttgagc
aaaatgaactttgagagtacagtaagggacctgttgttggtacgtcagtacagagtagag
atgtaccgtgctgctagtaaaggatcaaaaaatacatcagcctgggaactcgtagcaaag
gcttcaccaggaaatctacagcaatttgaagacattctctttggtaacaatgatatgtca
gtgtcaacagttgtcatgtcaattaaacttggcacagacaatggtcaaaggcttgttggt
gcctcatatgctgacccagctgcaagaaagctgggagtttgtgaatttgtggacaatgac
caattttcgaatcttgaggccctgttggtccaacttggcccaaaggaatgtcttcttccc
caacatgataccagccctgattcaaccaaagtactcgaagtgattcaaagaagtaatgcc
cttgttactgataggaaaaaagctgagttttccaacaaagacattgttcaagatctcaac
agacttttgaagatgggtgcctctggaaacagtgcaacacttcctgaaatggacctgaca
caagccactgctgcattagcagctttgatcaaatacttagagttgctttcagatgaaaca
aactttggccagtttcatttgagtacatttgacctatcacagtttatgaagcttgattca
gctgccgtgagggctcttaatcttcttccaaaccctttggatggggggaacaaaagtatg
tgtcttgtgggccttttgaacaagtgcaagacagctcaaggtcagagattgctagcccag
tgggtgaaacaaccactgatggacaaaagcaaaattgaggaaagacttgacattgtggaa
gtgttttttgaagatacggagcttagacaaaccattcaggaagaactgcgaaaagtccca
gatttttccagattggccaagaagttccaacgtcaaaaggcaactttgcaggattgtgtg
agagtgtaccaagcccttcacagacttcccacttttaatggtgtccttgcagcttatcaa
ggccatcaccatgaactaatacgggattgtttcacatcaccccttcaggatcttgtccag
gactttgaaaagtttacagagttagtggaaacaacagtggacctcgatcaagtggaaaac
cacgagtacttgatcaaggcctcttttgatgaagggctgcaagaatgcagagagaagatg
gatgagattttggaacagatacccattgaactaaacaaggctgcacgagacatggctctg
gaagcaggaaaatcaatcaagctggagtccaacaatcaatatggatatttttttcgaata
acaaaaaaagaagaaaaagctcttagaggcaacaaacactacaccacaatagacactcgg
aaggatggaataagattcaataattctgcactaaggcaattgaatgaacaattccaagct
ctcaaagaaacttacaatgaagtgcaaagcaaactagccaatgaagttatcaaggtggct
ggtggctacagtgaaccaatgcaaatgttgagtgacatcattgcaaacattgatgcctta
atcagctttgctcatgtttctgcgaatgctcctgttccatacatccgtcctaaaatgact
ccaaaaggagaggggcatataactcttcagatggccagacatccctgccttgaagtgcaa
gatgatgtagcttttattgctaatgacattacacttgagagaggtcaaaacgaatttctc
ataatcactgggcctaacatgggagggaaatccacttacattagacagacaggagtgata
gtccttatggcccagcttggttgctttgtaccctgcagttcagctgagatcgccatcact
gattctattttggcccgtgtgggatctggggatagccaattgaagggagtctctaccttc
atgtccgaaatgctggaaactgcatcgattttgaggtctgctacagagaattcacttatc
attattgatgaactgggaagaggcacttctacgtatgacggttttggactcgcttgggcc
atatcgcaaaacattgccacaaagatccattgtttctgcttatttgctactcatttccat
gagcttacctccctttctgatgaagtgcccactgtcacaaacctacatgtgacagctatg
acttcaagtggaactctaactttgctgtataaggtgaaacctggtgtttgtgatcaaagc
ttcgggattcatgtcgcagaactggcgcactttccaaaaagtgtcattgaatttgccaaa
caaaaggcagctgaactagaagatttccagggaaacactgcagcattaggtgaaggaatt
gtagatcctgacactggaacatcacccgccaaaagacgacgcttaatcaaacaagatgga
gaagaaatcataaaagattttctcacccaagttgccaagctgtcagtggaaacaatgaca
gaggaacaactcgcccatgaaatgtcgattttaaaggacaagatgcttgcaagaaaagat
ccctacatacaagacctgttggccaattga
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