Acropora millepora: 114962910
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Entry
114962910 CDS
T06134
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like isoform X2
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
amil
Acropora millepora
Pathway
amil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114962910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amil03041
]
114962910
Spliceosome [BR:
amil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114962910
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
PRP4
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_RFWD3
WD40_like
Beta-prop_WDR35_TULP_N
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
114962910
NCBI-ProteinID:
XP_029197829
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Position
13:complement(6072730..6122246)
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AA seq
517 aa
AA seq
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MSDDEDRAPVIKKQRIHFGSLEAVEKERLAEDPSSGTKEKEDDQEGEENGVSSAVLAGIR
AGNINISEGEYLELTEDQTSERHQELLAEFERRKKARAITVPTDDASVKARLRELEEPIT
LFGEGPPERRDRLRKLLSELGEDVPRKEEEEKAKHEPEIEEDVWYHEGPSELKVARLWIA
KYSLPRACERLKQMRIEQARPDPEKAAKTQELHRRLRGLNNFCSQIGDDRPLSFCQFSPD
SSMLATASWSGLCKLWSIPDCEPIAVLRGHNERVGSIAFHPQATTSLDESGPCMASCDAN
GVVLLWSLNMDTPLANIEGHEKRVSRVAYHPSGRFLATCCFDHSWRLWDLEQLEEVLHQE
GHSREVYSVAFQVDGSLAATCGFDGRGLVWDLRTGQCIMPLDGHLKKVLGIDFAPDGYRV
ATGSEDQKIIIWDLRKRQSIYTIPAHTNLISHVKFHDDYLTSASYDATIKVWSHPGWAPL
KTLTGHEQKISCVDVSPDGQYIVSSSFDRTFKLWSSD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacgaagatcgagcacccgtgattaagaagcaaaggattcattttggaagt
cttgaggctgtggagaaagaacgcctggcggaagatccctccagcggtacaaaggagaaa
gaggatgaccaggagggcgaagaaaacggtgtatcatcggctgtgttggctggaattaga
gcgggaaatataaatatcagtgaaggagaatacctggagttaacagaagaccaaactagt
gagaggcatcaggagcttttggcagaatttgaacgaaggaagaaggcacgtgcaattaca
gtacccacagatgatgcatcagtgaaggcaagactgagagaacttgaggaaccaatcact
ttatttggtgagggcccacctgagcgaagagacagattgagaaaacttttgtctgagctt
ggggaagatgtaccaagaaaggaagaggaagaaaaagcaaaacatgaaccagaaatagag
gaagatgtctggtaccatgaaggcccctctgaactcaaagttgcccgcttatggattgct
aagtattctttgccaagggcttgtgagagactcaaacaaatgcgcattgaacaagccagg
cctgatcctgaaaaagctgccaagacacaagagttgcatcgcagactacgggggcttaac
aatttctgtagtcaaattggtgacgacaggccactttcgttctgtcaattttctccagac
tcaagcatgctggcaacagcatcctggagtggcttgtgtaaactttggtcgattccagat
tgtgagcccatagcagttctgcgaggtcacaatgagagagtgggttcaatagctttccac
ccacaagcaacaacgtcattggatgagtctggcccttgcatggcatcttgtgatgcaaat
ggagttgtacttctttggtctctcaacatggacacaccacttgctaatattgaaggacat
gaaaagcgggtctctcgcgtggcataccatccatctggacgatttctggcaacttgctgt
tttgatcattcatggagactgtgggatttagaacagttggaagaagttcttcatcaggaa
ggacactccagagaagtttacagtgttgcttttcaagttgatggatcacttgccgcgacg
tgtgggtttgatgggagaggactggtgtgggacctacgaaccggacagtgtattatgccc
ctcgatgggcacctgaagaaggtccttggaatcgactttgctcctgatggatatcgcgtt
gcaacaggaagcgaagaccagaagattatcatctgggatttaaggaaacgacaaagcatc
tacacaattcctgcgcacaccaaccttatatcgcatgtcaagtttcatgatgattattta
acctcggcctcgtatgacgcaactatcaaggtttggtctcaccctggatgggcgccgctg
aaaactctcacaggccacgaacagaaaatcagttgtgtcgatgtgtcaccggatggtcaa
tacatcgtttccagctcttttgatcgcactttcaaactgtggtcatccgactaa
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