Acropora millepora: 114963953
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Entry
114963953 CDS
T06134
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
amil
Acropora millepora
Pathway
amil03020
RNA polymerase
amil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114963953
09124 Replication and repair
03420 Nucleotide excision repair
114963953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amil03021
]
114963953
03400 DNA repair and recombination proteins [BR:
amil03400
]
114963953
Enzymes [BR:
amil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114963953
Transcription machinery [BR:
amil03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114963953
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114963953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
114963953
NCBI-ProteinID:
XP_044172694
LinkDB
All DBs
Position
2:18333410..18349856
Genome browser
AA seq
1180 aa
AA seq
DB search
MYDPDDDAVYDDDDGEEITRDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPEIDLQAESLHMTSDTETPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLT
YSAPLYVDITKTMIKEDDDSAVTQHSKMFIGKIPIMLRSTYCLLNGQTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSKKDSKYSFTAEIRSCLEHSSRPTSTMWVSM
LAKGSQGGRKSAIGQRIVGTLPYIRQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRMYA
QKFIDRGKDFNIELALKPKVITDGLRYSLATGNWGDQKKAHQSRAGVSQVLNRLTFASTL
SHLRRLNSPIGREGKLARPRQLHNTHWGMICPAETPEGHAVGLVKNLALMAYISVGSQPS
PILEFLEEWTMENLEEITPSAIYSATKIFVNGCWVGIHRDPDQLMSTLRKLRRQMDIIVS
EVSMVRDFREKEIRIYTDAGRICRPLLIVENQRLLLRKHHIDQLKEREYNNYSWQELVAG
GIVEYIDVNEEETVMVAMTPDDLMVEKGQAYCSTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNYHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINA
IAAIASYTGYNQEDSVIMNASAIDRGLYRSVFYRSYRDQESKRGMDQEETFEKPTRDSCQ
GMRNAVYDKLDDDGLISPGTRVSGDDVIVGKTVTLPENDDELEGTTRRFTKKDSSTFLRP
SETGIVDQVMVTINQEGYKFTKIKVRSVRVPQIGDKFASRHGQKGTCGITYRQEDMPFTC
EGITPDVIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSQLLNDY
GYHLRGNEVLYNGFTGRKLNAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPMEGR
SRDGGLRFGEMERDCMIAHGAAQFLNERLFEVSDPYSCHVCNLCGLIAIANLRNNTFECR
GCKNKTQVSRIRMPYAAKLLFQELMSMSIAPRMMVCDPVK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcccgacgatgatgccgtatatgacgatgacgacggggaagaaatcactcgg
gatctgtggcaagaagcgtgctggattgttatcagttcatattttgacgagaaaggtttg
gttcgtcaacagttggattcctttgacgagtttattcaaatgtctgtgcagcgaattgtg
gaagactccccggaaattgacctgcaagctgagtcacttcacatgacttcagatacagaa
acaccaccaagatatctcctcaaatttgaacaaatttatctttccaagcctactcactgg
gaaaaggatggcgctccaagccctatgatgccaaatgaagctaggcttagaaatcttact
tattcagctcctctttatgttgatataaccaaaacaatgatcaaagaagacgatgattct
gccgtaacacaacacagcaaaatgttcattggcaagattccgatcatgctgcgttccact
tactgcttgttaaatggccagactgatcgtgatttaacagaacttaacgagtgtcccttg
gaccctggaggttactttatcatcaatggatcggagaaagtacttatcgctcaagagaaa
atggccaccaatacggtttatgtgttctctaaaaaggactcaaagtattccttcacggca
gaaatccggtcttgcttggaacattcatcacgacccacgagtacaatgtgggtctcaatg
ctggctaaaggaagccagggaggtcgcaagagtgccattggacagcgtattgtgggaact
ctaccatatatcaggcaagaaattccaatcatgattgtgttcagagctctgggttttgtg
gctgatcgagatatcttggagcacattatttatgacttcgatgatcctgaaatgatggaa
atggtaaaaccatccttagatgaggcttttgtgatacaagagcagaatgtggctctaaat
ttcattggatctcgtggtgcaagacctggtgtgacaaaagagaagcgtataaagtatgca
agggaaatccttcaaaaggaaatgctgccccatgttggagtcagtgatttctgtgaaaca
aagaaagcatactttttaggttacatggttcatagactattgttggcagcacttgggagg
agagaactagatgaccgtgatcactatggaaacaaacggcttgacctggcaggacctctg
ctggcctttctctttagagggttattcaggaatcttatgaaggaagtgagaatgtatgca
cagaagtttattgacagggggaaggatttcaacattgaattggccctcaaacccaaggtg
attacagacgggctaaggtactcccttgcaacaggaaactggggtgatcagaagaaagct
catcagagccgtgcaggtgtgtcacaggttcttaacagattgacatttgcatcaacctta
tcccacctgcggcgcctgaactctcccattggtcgcgagggcaagttggctcgtcctcgg
cagttgcacaacacccattggggtatgatctgccctgctgagactccagaaggacatgct
gtgggattagtgaagaatcttgctctgatggcctatatttctgttggctcacaacccagc
ccaatcctggagtttttggaggagtggaccatggagaatttggaagaaatcacaccatcc
gccatttacagtgcaaccaagatatttgtaaatggatgttgggttgggatccatcgagat
ccagaccaacttatgagtaccctgaggaaactccgaagacagatggatattattgtgtct
gaggtttccatggtgagagatttccgagaaaaggagattagaatatacacagatgctggt
cgaatttgtcgaccattgttgattgtggagaatcaaagattgttactgaggaaacatcac
attgatcagttgaaagaaagagagtacaacaactatagctggcaagaattggtcgcagga
gggattgtggaatatattgacgtgaatgaagaggaaacagtgatggttgccatgacaccc
gatgacctgatggtagagaagggacaagcttactgttcaacttacactcattgtgagatc
catcctgccatgatcctgggtgtctgcgcctcaattattccattccctgatcacaaccag
tctccccgtaacacgtatcagtctgctatggggaaacaagctatgggtgtttacattaca
aactatcatgttcgcatggacacacttgcgcatgtgctgtactaccctcagaagcctctg
gtaactacacgctccatggagtatctcagattcagagagttgcccgctggaataaatgct
attgcggcgattgcatcttacacgggttacaatcaggaagattcagttatcatgaacgct
tcagctattgacaggggtttgtacagatcggtgttttaccgttcgtaccgcgatcaagag
tcgaagcgaggaatggatcaggaagaaacatttgaaaaaccaacaagggattcttgccaa
ggcatgcgcaatgcagtttatgataaactggatgatgacggactcatctctcctggtacg
cgcgtgagcggtgatgacgtcatcgttggaaagacagtaactttaccagagaatgatgac
gagttggagggaacaacccgccgctttaccaagaaagactcaagcaccttccttcgccca
agtgaaacaggcatagtggatcaggtaatggttacaatcaatcaagaaggatacaagttc
actaaaatcaaggtgcgctcagttcgtgtacctcaaataggagacaagtttgccagtcga
catggtcagaagggaacttgtggaatcacttatcggcaagaggatatgccgttcacctgt
gaaggtatcacccctgatgtgattattaatcctcacgccattcccagccgtatgaccatt
ggtcacttgatcgagtgtctgcaaggaaaggtgtcggccaacaagggagagatcggagat
gccacgccctttaacgatgctgtgaatgtgcagaaggtatctcaacttcttaacgactat
ggataccatctccgaggtaacgaggtcttgtacaatggatttacaggaagaaagctaaac
gctcaagttttcttgggtcctacttattaccagcgtctgaagcacatggtggatgacaag
atccactcccgagccagaggtccagtccagatccttactaggcagcccatggagggtaga
tctcgtgatggtggcctgcgttttggtgagatggaacgtgactgtatgattgctcacggg
gcagctcagtttctgaacgagcgcttgtttgaggtgtctgatccgtacagttgtcatgtc
tgtaatctctgtgggctcatcgctatcgccaatttacgaaacaatacctttgaatgccga
ggatgcaaaaacaagacgcaggtgtcacgtattcgcatgccctacgccgcaaagcttctc
ttccaagagctgatgtccatgagcattgctcctcgtatgatggtgtgcgatccagtcaaa
tga
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