Acropora millepora: 114964805
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Entry
114964805 CDS
T06134
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114964805
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114964805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
KH_N4BP1_1st
UBA_6
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
114964805
NCBI-ProteinID:
XP_029200069
LinkDB
All DBs
Position
2:18999520..19002572
Genome browser
AA seq
724 aa
AA seq
DB search
MEEFVIQEDKTTILKANTERVHTLFGVKVTFTPNSHGTNQWVRITGSTKEQREKAKTYVA
SLCSNEPKRRVDCCIPPRMFKDLKNGSGRREIEEHSGAVLSFSESQAYLQGDDLAIGLAL
SKIEEKIRTFGEQKKQQDASVQDAGDGDDGDEEHDAINIGTVSTCDTAKDISPHMREFAR
KLLYSDKQIDAVVRTFGTDININKLLIELVKYSASTNQTSPSTEVTSMRPIARGPPARNL
VSRGRPSGLAPKHDLHDMADQLVKPLPAPDNLRPIVIDGSNVAMHHGNQNIFSCRGIMLC
VEYFLKRGHTDITVFVPMWRSEEPLPESQISDQKILSDLARQNILKFTPSRRSGNRNIVC
YDDNFIVGLADKNEGIVVSNDNFNDLHEKNPKWRETIEQRTLGYVFRGDLFMPAEDPLGR
YGPCLDDFLRRGSATHPKICPYLKNCTFGNRCRFYHPERDTQRQREKSPIGTLVDGSECS
STGPGRARTMTSTNQLTWNPQSITVGDPRVSPQSNVLQQRVHPPPNEVPLSDLVGDPRVS
FPPTFQQEIAVRGRSQFGPIGPSYDIGVHQLSSEQYYPGNQHSGRVYSDYSRPPYPEAVY
CPDRRFPAPLPPTQWSPYGQHPFPSPRSEVYPAGTGHCSYVGAYFEPAHVSYDNFQGQAP
RDHVDCGVNSQDSRGSQVKIDPALVDKFVNIFKLDKETITRVLQDHPNECADGDVNKLAD
LFCK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatttgtcatccaagaagacaaaaccacgattttgaaagcgaataccgaaaga
gtgcatactttgtttggagtcaaagttacgttcactcctaattcacacggcacaaatcag
tgggttcgtatcacaggctctactaaggaacagcgtgaaaaagcaaagacttatgtggct
tcgctttgtagcaacgaaccaaagcgccgcgtcgattgttgtataccgccgaggatgttc
aaagacctgaaaaacggcagtgggcgcagggaaatcgaagaacattctggcgcggtgttg
tcgtttagtgaatcgcaagcttacttgcagggtgacgatttagcaattggtttggcactc
tcaaaaatcgaggaaaagatccgtactttcggcgaacagaagaaacaacaggatgcctca
gtgcaagacgcaggagatggtgacgatggtgacgaggaacacgatgcgataaacattggc
actgtttcgacttgtgacaccgcgaaagacatctcgcctcacatgagagaatttgcccgc
aaacttctgtacagtgacaaacaaattgacgcagtcgtaagaacctttggaacggacatc
aacatcaataagcttcttatagaacttgtgaagtattctgcatcgacaaatcagaccagt
ccttctaccgaagtcacaagcatgcgtcctatcgcacgcggtcctcccgctcgaaacctt
gtcagtagaggtcgaccgtcggggctggctccaaaacatgatttacacgatatggctgac
cagcttgtgaagccgcttcctgctcctgataatttgcgacccattgtgatcgatggtagt
aacgtggccatgcatcatggtaatcagaacatattttcctgtcgtggaataatgctctgt
gttgagtacttcttgaaaagaggacatacagacattactgtcttcgttcccatgtggaga
agtgaggaacctcttccagaaagccaaatttcggatcagaaaatccttagcgatctcgcc
agacaaaacattctcaaattcacaccgtctcggcggagtggaaatcgcaacattgtgtgc
tacgatgacaatttcatagtcggattagccgataagaacgaagggatcgttgtatccaat
gacaattttaatgatttgcacgagaaaaatccgaaatggagagaaactatcgaacagcgg
accctgggctacgtctttcgtggagatctgttcatgccagcagaggacccccttgggcgt
tatggaccttgtttagatgactttcttagaaggggctctgcaacacatcccaaaatatgc
ccttacttaaagaattgcacatttggtaatcgatgcagattctatcacccagagcgagac
actcaaaggcaacgtgagaaatccccaatagggacattggttgatggttccgagtgctcg
tccactggacctggtagagctcgtacaatgacgtccacgaaccagttaacttggaacccg
caaagcatcactgtaggggaccctcgagtctcccctcaaagcaacgttctgcaacagcgt
gtccatcctcctcctaatgaggttcctctcagcgatctcgttggagatccccgggtgtcc
ttcccgccaactttccaacaggaaattgctgtccgtggaagaagccagtttggcccaatc
ggtccttcatatgatattggtgttcatcaattaagcagcgaacagtactatccaggaaat
cagcatagtggacgtgtttacagcgactattctcgcccgccatacccggaagccgtctac
tgtccagatcgccggtttcctgctccacttccacccacgcagtggtctccatacggtcaa
catcctttcccttcaccgcgcagcgaggtatatcctgcgggtaccggacattgtagttac
gtaggagcttactttgaacccgctcacgtttcctacgataatttccaaggccaggcacca
cgagatcatgtggactgtggtgtcaactcgcaggatagtcgtggaagtcaagtaaaaatt
gaccccgctttagtcgataagttcgtaaacatttttaagcttgacaaagagacaatcact
cgcgttcttcaagatcacccgaacgaatgcgcggacggggatgtgaataaactagcagat
ctcttttgtaaatag
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