Acropora millepora: 114964861
Help
Entry
114964861 CDS
T06134
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amil04040
]
114964861
Ion channels [BR:
amil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114964861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
ANK_LRRK2
PKD_channel
Shigella_OspC
Glyoxalase_6
Motif
Other DBs
NCBI-GeneID:
114964861
NCBI-ProteinID:
XP_029200136
LinkDB
All DBs
Position
14:15407564..15433662
Genome browser
AA seq
1078 aa
AA seq
DB search
MRKMDSSRNGSMPSEGPSSEEIPLISLTSVLDKQKRAQDLSLLSLKSTTSHNFDAAPVDV
TDAENGDNPDKLHLACWSGNEAEVKKTLIDEKAKIDVNALDSSGRTPLHNAILGRHVKII
QLLLESDADTSLLDRSQDAPLHGAVRSGHEDLVQALLSGAKCDLSLTAKRSQTALHIAAE
LDNAKICKILIEAGASQDCLDDERMTPLSRSVEKGACNVAKYFFEDAKQKDKDMMEDVLS
NVDSDGSTLLHLAVDSGSSEMVQLCLEYGAVIRQPKENDKSTAFHLACGAGELDIVKLFA
SEDDKICRVTLVDAQGWTPLHLAAMNNHPDVVKYLLEKGASVNPRDKQRRTPLFLAAERG
GKEAVQVLINSGANVRAKDIDLRSCVRVAVGNSATMGELLKKRAAIPLITDKDITGFAPV
HYAAKYGNLENILLFMKWNKGTAVVTSDSLDTALHGAAKYGWPDIVDALLAGRNIRSINV
KNNQGKTALHFACAEGHDRVVEQLLKLGATVGSDHNNRTALHVAAMRGSKRCVECILKHH
PQSINLLDKNQNTALHLAATGGHPDVVTLLLSSDKQEILMNKKNQNVLDAAMEAEQKKVL
LAIVSHKRFREVLASCAPGQMAQMNAFVLKYPEVAERCMDQCVSKDGNPDNRDYKITYDF
SLIQGARKAGQDYLMVLKTMLANRRISCLTHPVCFIIMNTKWKTFGWITLTFNLLLYLSF
VIPLTSLAIYQRAYEKRLCEINESWPRKKYIDMDVPCRRFDQVAQGLQIWVVIIASLHLI
KELLQLRVKKIKYFFELSNTLEWVGYISSLIYVFPNCDCKLGVKHQSGAIALFFGWMNLI
LFLRRLSAYGQYVIMLTTMLRTLLKVLLLLFLFVLGFGSTFYLLMDDETERFASFPYSMM
TIFVMTLGELNYADVLMPWDKHEYSTLSNVLFIMFVLGMPIIIMNMLVGLAVGDIDKIQE
NAVLDRYVMQVELVLYMEETSPEWLRKKAHIAKYVEYPNKKSKLFEKFIGFSRPGEDKDD
EEAYPGLPPAFHPLMEKVAEQEKRINGIYDLLKEQSALIKSLDPIKKSQEGKGGYKDY
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatggacagcagcagaaatggatccatgccgtctgaaggccccagcagcgaa
gaaatccccttgatatccctgacttccgtcctagacaagcagaaacgagcacaagatttg
agccttttgtctctaaagtcaactacaagtcataacttcgacgccgctcccgttgacgta
acggatgctgaaaatggagacaaccccgacaaattacacttagcttgttggtctggaaat
gaagctgaagtgaagaaaacgctgattgatgaaaaagcaaaaatcgatgtgaatgccttg
gacagttcaggaaggactccattgcataacgccattctaggacgtcatgttaaaatcatc
cagctgcttttggagtctgatgccgacacatcgcttctcgatcggagccaagatgcacca
cttcacggcgccgtccgctctgggcacgaggaccttgttcaagccttgctcagcggagcc
aagtgtgatttgagtctgacagcaaaacgttcacagactgccctgcacatcgctgcggaa
ttggacaacgcaaagatctgtaaaatccttattgaagctggcgcctcacaggactgttta
gatgacgagaggatgacaccccttagtagatcagtcgaaaaaggagcctgcaatgttgca
aaatattttttcgaagacgcaaaacagaaagataaagacatgatggaagatgttttaagt
aacgtggattcggatggaagtactttgcttcacttggcagttgacagcggaagttctgaa
atggttcaactctgccttgaatatggagcggtcattcgacagccaaaggaaaatgacaaa
agcacagcctttcatttggcttgtggcgcaggcgaactggacatcgttaaactctttgct
tctgaagatgacaaaatttgtcgcgttactctggtcgacgcgcaaggctggacaccactg
cacctggctgcgatgaataatcacccggatgttgtgaagtatctcttggaaaagggtgcc
tcagtgaaccctcgtgacaaacagcgccgcacccctctcttcttagcggctgaacgagga
ggaaaggaagctgttcaggttttaatcaacagtggtgctaatgtgagagcgaaagacatt
gacctacgatcttgtgtcagggttgctgtgggcaattcagccacaatgggagagctactg
aagaaacgggcagctattcctctaattacggacaaggatatcacggggttcgcccctgtt
cattacgctgcaaaatatgggaatctggagaacatcttacttttcatgaagtggaataaa
ggtaccgctgttgttacgtcagattctttggatacagcgcttcatggtgcagcaaaatat
gggtggccagatattgtcgatgcattgctagccggtcgcaacatccgctcgatcaacgtg
aaaaacaaccaaggaaaaacagccttgcactttgcatgcgcagaaggacatgacagagta
gttgaacagctcctgaaacttggtgcgactgtggggagtgatcacaacaacagaacagct
ctacacgtggcggccatgagaggctccaaaagatgcgtggaatgcattctgaaacaccat
cctcaaagtatcaatctcttggataagaaccagaatactgctctgcatttagccgcaaca
ggaggtcaccctgatgtagtaacactcttgctttcatctgacaagcaagaaattcttatg
aataaaaagaaccaaaacgttttagacgcagccatggaggctgagcagaagaaagtgctg
cttgctattgtgagccacaaaaggttcagagaggtgctggcgtcatgcgcgccaggtcaa
atggcgcaaatgaatgcatttgtgttaaagtacccagaggttgctgagcgatgtatggac
cagtgtgtttctaaagacggaaatcctgataatagggattataaaataacatacgatttc
tctctgatacaaggagcccgaaaggctggccaagactatttgatggtgctcaagacaatg
ttagctaaccgacgaatcagttgcttgacgcatcctgtgtgttttatcattatgaacacc
aaatggaaaacctttggttggataacactgacattcaaccttcttctgtatctttccttt
gtgattccactgacatcacttgcaatctaccagcgggcttatgagaaaagattatgtgaa
atcaatgagagttggcccagaaaaaaatacattgatatggacgtcccgtgcaggagattt
gaccaggttgctcagggtcttcaaatttgggtggtgatcattgcgtcacttcacctgatt
aaggagcttcttcaactaagagtgaagaaaatcaaatatttctttgaattgtccaacact
ctggagtgggttggttacatttcatccttgatttatgttttcccaaactgtgactgtaag
cttggagtcaaacatcaatccggggccattgccctcttctttggatggatgaacctcatc
ctctttctgagaaggttgtcagcttatggccaatacgttataatgttgacaactatgctt
aggaccctgctaaaggttttattgctgctgttcttattcgttttgggatttggaagcaca
ttttatttgcttatggacgacgaaacggagcgtttcgcgagttttccttactccatgatg
acaatttttgtgatgacacttggtgaactgaattatgccgatgtgttgatgccgtgggat
aagcatgaatattcaacactgagcaacgttctcttcattatgtttgtactgggaatgcca
atcataattatgaacatgttggtcggtctcgctgttggagacattgataagattcaggaa
aacgcagtgttggatcgctacgtaatgcaggtggaattggtcctctacatggaagagacc
agccctgaatggcttcgtaagaaagctcatattgccaagtacgtggagtaccccaacaag
aaatccaagctgtttgaaaagttcattgggtttagccgccctggggaggataaagatgac
gaggaagcttacccaggcctcccccctgcatttcatcccttgatggagaaagtggcagag
caagagaagagaatcaatgggatctacgatctactgaaagaacaatcagcattgatcaag
tcattggatcctattaagaagagccaggagggaaaaggaggatacaaagattactag
DBGET
integrated database retrieval system
