Acropora millepora: 114964866
Help
Entry
114964866 CDS
T06134
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amil04040
]
114964866
Ion channels [BR:
amil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114964866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
PKD_channel
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
114964866
NCBI-ProteinID:
XP_029200142
LinkDB
All DBs
Position
14:15363016..15380341
Genome browser
AA seq
1113 aa
AA seq
DB search
MLLLSFFEQWQLHAQFENYEGPRGICKAQMDRNFANVTLPLGTPNDDELLLLPVSPALNR
RQRAQDLSQLSLRSAGSYFGRISVNACHDIEEGHSEEHPDKLQLASWSGDEAAVESMLNE
ETVDVNSLDHSGRTALHNAILGCHEKIIVLLLESGADTSILDRSQDPPLHTAVRTGNETL
VKALLSVTQSDTNIRGNGSQTALHIAAGLDNLSLCKILIENGASQDCCDDEQMTPLTRAV
EKGAFNVAEFFLHEVKENKKHKVKDLLENVDSEGSTLLHLAVDSGSLKTVQLCLDQGAII
RQPKEHDRSTAFHLACAVGALRIVQLFVTKDPTISRITLIDAHGLTPLHLAAMNNHPDVV
KYLLDQGASLDSPDNVRRTPLFLAAEMGGTESVKMLIDMGADVTVKDVDLRSCVRVAVGH
AATMEVLLQKEQAIPLITDKDITGFAPVHYAAKHGHLQSFMLFMKRNKNTATVTSDGLDT
ALHGAARYGRLEVVDALLSGRNVRSINVKNSEGKTALHFACAEGHNRVAEHLLKLGAAVE
SDNNHRTALHLAAMKGSKRCTQYILESHPKCVNLLDKNQNTALHLAAIYGHPEVVSTLLS
SEKQDIVMNRKNQNVLDAAMEAQQKDVLLAITSHRRWREVLTSSKPGPMAQMSALAVKYP
EVAKRFMDQCVTKEGNPDGEDYKITYDFSLIQGAHKAGEDCLMVLKTMLLHRRLNCLTHP
LCFYIMNTKWKTFGFQTLTANLLLYLLFVIPLTVLAIFIRANEKALCGINETWKRKEYIG
IEVPCITTNKLVQTLQYAVAVVTLLHMIKELLQLRKQGSTYLLSLTNYLEWSAYGLTLLY
IFPPCDCKLGFKQEIGALALFSGWINLVLFLRRLSSYGQYVIMLTTMFATLIKVWILFFL
FIVAFGSTFYILMDEETLSYSTFPNSMMTVFVMTLGELNYEDVFMPWDKLEYAMLTNLLF
FMFVLGMPIIIMNMLVGLAVGDIDKIQMNAVLDRYVMQAELVLEMEEWVPSWLAKRANIG
KYVEHPNQKSSKLFDRLFGFSRPGDDEEKHKSFLDHRHVYHSLLERMEEQESRINGIYEV
LKQISSVMKTEKANVPSKRVGDIKPGRSHFFPF
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgctattgttatccttttttgaacaatggcaattacatgcacagtttgaaaattacgaa
ggaccaaggggcatatgcaaggcacagatggatagaaatttcgctaatgtgacgttacca
ttagggacacctaatgacgacgaattgctcctacttcccgtcagtcctgccctgaatagg
cgtcagcgagcacaggacttgagtcagctgtctcttaggtcggctggaagctactttggc
cgaatctcggtgaatgcctgtcatgatattgaggaaggtcacagcgaagagcatcctgac
aaacttcaactagcttcctggtctggtgacgaggctgccgtggagagcatgctgaacgaa
gaaactgttgatgtgaattccttggaccactcaggaagaactgcacttcacaatgccata
cttggatgtcacgaaaaaatcatagtgctgctcttggagtctggtgccgacacctcaatt
ctggataggagccaggatccgccccttcacactgcagttcggactgggaacgagacgctt
gtcaaagcccttctcagtgttactcagagtgatacaaatatcagaggaaatggctcacag
acagcacttcacattgctgctggactggacaacctctccctttgtaaaatactgattgaa
aacggcgcatcacaagactgctgcgatgacgaacagatgactccgttgacacgagcagtg
gaaaaaggagcctttaatgttgcagaattttttcttcacgaagttaaagaaaataagaaa
cacaaggtgaaagatcttcttgagaatgtagattcagaaggcagcactttgctacactta
gcagtggacagtggaagtcttaaaacggttcaactgtgtctggaccaaggagccattatt
cgacaacctaaggaacatgatcgaagtactgcatttcatttggcatgcgcagtaggcgcc
ttgaggatcgtccagctgtttgtaactaaggatcctaccatctcccgcatcactttgatt
gacgcccatggtctaacacctctgcacttggctgccatgaataaccaccctgatgtagtg
aaatatctcttggatcagggtgcctcactggactcccctgacaatgtccgccgcactcct
ctattcttagcagctgagatgggtggcacagaatctgtcaaaatgctaatcgacatgggt
gctgacgtcactgtcaaagatgtggatttacgatcatgtgtcagggtggctgttgggcat
gcagcgacaatggaagtcttgcttcagaaagagcaagcaattccgctaatcactgacaag
gatatcacggggtttgctcctgtccactatgctgcgaaacacgggcatttacagagcttc
atgttgttcatgaaacgaaacaagaacactgccactgtgacttcagacggtctcgatact
gcgctccacggcgctgccagatatggtcgtctagaagtggtagacgcgttgctatccggt
cgcaacgtccgctccatcaatgtaaaaaacagcgagggaaaaacagctttgcacttcgca
tgcgcagaaggacataacagggtagctgaacatttactaaagcttggtgcagctgttgaa
agtgataacaaccacagaacagcgcttcacctggcagccatgaaaggctccaagagatgc
acacaatatattttggaatctcaccctaagtgtgttaacctccttgacaaaaaccagaac
actgctttacatcttgctgcgatctacggtcatcctgaagtcgtgtccactttactctct
tctgaaaaacaagatattgttatgaacagaaagaatcaaaacgtgttagatgcagccatg
gaggctcaacaaaaagacgttttgcttgctattacgagccacagaaggtggcgcgaggtg
ctaacatcatctaaaccaggtcccatggcacagatgagtgcgcttgccgtaaaatatcct
gaggttgctaaacgattcatggatcagtgtgtaacaaaagaaggaaatcctgacggcgag
gattataagataacgtatgatttctcactgatccaaggagctcataaggctggtgaagat
tgtttgatggttttgaagacaatgctcttgcatcgtcgtctcaactgcttgacgcacccc
ttgtgcttctacatcatgaacaccaagtggaagacatttggatttcaaacgctgacggca
aatctccttctctatctgctatttgtaattccgttgactgtcctcgccatcttcattcgc
gccaatgagaaagccttgtgtggtattaacgagacctggaaaagaaaggaatacattggt
atagaggtgccgtgtattacgaccaataagcttgttcagactctgcaatatgcagtagca
gtggtcaccttgctgcacatgataaaagagctactccagctcagaaaacagggaagcaca
tatcttttgtccttgacaaattatctcgagtggtcggcctatggtttgaccttgctatat
attttccctccatgtgattgcaagctcggattcaagcaagaaattggagctcttgcattg
ttctctggatggatcaatcttgtcttgttcctcagaaggctgtcgtcgtatggccaatac
gtcatcatgctgacaactatgtttgcaactctaatcaaggtttggattttgttcttcttg
tttatcgtggcgtttggcagcaccttctacatactcatggatgaagagacgctgtcatac
tcgacgtttcccaactccatgatgacggtgtttgtgatgacgcttggggaactcaactac
gaagacgtttttatgccgtgggataaactggaatatgctatgctcaccaaccttctgttt
ttcatgtttgtattgggaatgccaatcattataatgaatatgctggttggccttgcagtt
ggagatattgataaaattcaaatgaatgctgtattggatcgatacgttatgcaggcggaa
ttagtgttggaaatggaggaatgggttccttcttggctcgcaaaacgtgctaatatagga
aaatacgttgaacacccaaaccaaaagtcatctaagctctttgatagactatttggcttt
agccggccaggagacgacgaagaaaaacacaaatctttccttgaccatcgtcatgtatat
cactcactgttggagagaatggaggaacaagagagcagaatcaatgggatttacgaagtc
ttgaagcaaatatcttcggttatgaagacagagaaggctaacgttccttcaaagagggtg
ggagacataaaaccagggagaagtcacttctttcccttttaa
DBGET
integrated database retrieval system
