KEGG   Acropora millepora: 114965239
Entry
114965239         CDS       T06134                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
amil  Acropora millepora
Pathway
amil03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114965239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amil03041]
    114965239
   03036 Chromosome and associated proteins [BR:amil03036]
    114965239
Spliceosome [BR:amil03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    114965239
 Complex B
    114965239
 Complex C
   U2 SnRNP specific factors
    114965239
Chromosome and associated proteins [BR:amil03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    114965239
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG UNC45-central
Other DBs
NCBI-GeneID: 114965239
NCBI-ProteinID: XP_044179779
LinkDB
Position
7:5425487..5452027
AA seq 1313 aa
MATLAKAPTTYEEIEKQAQLIQAQRSNLPKVDVGEKVRLASVGYDVDIYGSGENRFEGYS
TDIAPNEQEEDEDDYSATIMHPSRNGYTAPAALLNDIAHSGEHVDPFDQHRQPTIAERED
EYRARRRQMVISPPRHDPFADGGKTPDPSLLKNVRTYKDIIQEMDLQKDQAEIFRHVRDQ
AASGELQKTKEAAAAAAKPERKRRRWDQQASGEETPVKKKSSSWDQAEISTPSASRWDET
PGRPKGSETPGVTPHRPGSETPGATPSTRIWESTPGHVTPGHATPSATPGGISSTRRNRW
DETPKTERGETPGHATPGWAETPRTDRTGAETPGATPTPGSKRRSRWDETPASQMGGTTP
MIGTSGVTPAGAAAMQMQTPTPGQMAMTPEQMQAYRWEREIDERNRYLSDDELDSLFPKE
GYKILEPPPGYQPIRTPTRKLTATPTPVGGSGFYIQQEDRSAKLVEDQPPGNLPYLKPDD
VQYFDKLLVDVDESTLSPEELKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPL
FNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPFVHKILVVIEPLLIDEDYYARV
EGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAV
CRSKKSWQARHTGIKIVQQIAILMGCAILPHLRNLVEIIEHGLVDEQQKVRTITALALAA
LAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVML
ILIREFQSPDEEMKKIVLKVVKQCCATDGVEAQYIKDEILPDFFKHFWQHRMALDRRNYR
QLVDTTVELANKVGASEIINRIVDDLKDENEQYRKMVMETIEKTMGNLGSSDVDSRLEEQ
LIDGILYAFQEQTQEDIVMLNGFGTVVNALGKRVKPYLPQICGTILWRLNNKSAKVRQQA
ADLISRIAQVMMTCGEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMNKMTP
PIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEHVGAREWMRICFELLELLKAHKK
AIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPA
LMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACAA
IKHMALGVAGFGCEDALTHLVNYVWPNIFETSPHVINAVMESIEGMRVALGPSRVLHYCL
QGMFHPARKVRDVYWKIYNSLYIGSQDSLVAAYPTAPSDEKNNFVRSELTYFL
NT seq 3942 nt   +upstreamnt  +downstreamnt
atggctactttagcgaaagcacccacaacttatgaagaaattgaaaagcaagctcagcta
atacaagcccaaagatcgaatttgccgaaagttgatgtcggcgaaaaggtcagattagct
tcggttggttacgatgtggacatttatgggtccggcgaaaatagatttgaagggtactct
actgatattgccccaaatgaacaagaggaggatgaagacgattactctgcaaccattatg
catccgtcaagaaatggctacacagctcctgctgcattgttgaatgacattgctcattct
ggagaacatgtggacccatttgatcagcacaggcagccaaccattgcagagcgtgaggat
gagtacagagcaagaagaaggcagatggtgatatctcctccaaggcatgatccttttgca
gatggtgggaaaacacctgatccaagtttgttaaaaaatgtcagaacctataaggacatc
attcaagagatggatctgcaaaaagatcaggcggaaatatttcgtcatgttagagaccag
gcagcatctggagagttacaaaagaccaaggaagcagcagcagcagcggctaagccagag
aggaagcgtcgtagatgggaccaacaagcatcaggagaggaaacaccagtcaagaaaaag
tccagcagttgggaccaagctgagatttccactccttctgctagccgatgggatgaaact
cctggtcgtccgaaaggctccgagacccccggggtaactccccacagaccaggctcagag
actccaggggcaacccctagtacaaggatatgggagtcaacaccaggtcacgttacccct
ggacatgccacacccagtgctactccaggaggaatatcatcgacaagaaggaatcgctgg
gatgaaactcccaaaacagagagaggtgaaactccagggcatgcaacacctggctgggca
gagacaccaagaacagaccgaactggggcagagacacctggtgctacacccactcctggc
agcaagaggcggtccaggtgggatgagacgcctgcaagtcaaatgggaggcaccactcct
atgattggtacaagtggagtgacacctgctggggctgctgccatgcagatgcaaacccca
accccaggtcagatggccatgacaccagagcagatgcaagcatatcgctgggagagagag
attgatgaaagaaacagatacctgtcagatgatgagctggattctcttttccctaaggaa
ggatacaagattcttgaacctccacctggttaccaacctatcagaactccaacacggaaa
ctgacagcaacacctactccagttggaggcagtggtttctacatccagcaagaagacaga
tctgccaaacttgttgaagatcaacctccgggtaacttgccatatcttaaaccagatgat
gtacaatactttgacaagctcttggtggatgttgatgaaagcactttgagtccagaagag
ttgaaagagagaaagatcatgaaactgctgttgaagatcaaaaatggtacccctcctatg
aggaaagcagcactgagacagataacagacaaggcccgtgaatttggtgctgggccgctg
tttaaccagattcttcctctccttatgtctcccacattggaagatcaggaacgtcacttg
ctggtgaaagtcattgatcgcattttgtacaagcttgatgatcttgtccggccttttgtt
cacaagatccttgttgttattgagccgctgttgattgatgaagattactatgccagggtg
gaaggacgtgaaattatttccaacttggccaaggctgctggtttggctaccatgatctcg
accatgagaccagatattgacaacattgatgaatatgtccgtaacacaacagcaagagcc
tttgctgtggttgcttctgcccttggtattccttcattgttgccattcttgaaggctgtt
tgccgcagtaagaagtcatggcaggcaaggcatacaggaatcaaaatcgttcagcagata
gctattttgatgggctgcgccattttgccacacttgagaaacttggtggaaattattgag
catggtttggtcgatgaacagcagaaggtgcgtacaatcactgctcttgccttggcagct
cttgctgaagcagccacaccctatggtattgaatcttttgacagtgtgttgaagccactg
tggaagggtatcaggcagcacagaggaaagggtctcgctgcctttctcaaagccattgga
tatcttatcccacttatggacgctgagtatgccaattactacaccagagaggtgatgttg
atcttgattcgtgagtttcagagtcctgacgaagaaatgaaaaagattgtgcttaaggtg
gtaaagcagtgttgtgcaacagatggtgtcgaagctcagtacatcaaggatgaaattttg
cccgatttcttcaagcatttctggcagcacaggatggcactggacaggcgaaactacaga
cagctggttgacaccacagtagaattggccaataaggttggagcatcagagatcatcaac
agaatagtggatgacttaaaagatgagaatgaacagtacaggaagatggttatggaaacc
attgaaaagactatgggtaaccttggatcttccgatgtggattcacgactggaggaacag
ctgattgatggcatcctgtatgccttccaggaacagacacaagaggacattgtgatgctg
aatggctttggcacagtggtgaatgcccttggcaagcgagtcaagccgtacttacctcag
atatgtggtaccatcttgtggcgattgaacaacaagtctgccaaggttcgacaacaagct
gctgatctgatttcaagaatcgcccaggtcatgatgacctgtggagaggaaaagctcatg
ggtcatttaggtgtggtcttgtacgagtacctcggagaagagtacccagaagtacttgga
agcatcctgggcgccctcaaggcaattgtaaatgtcatcggcatgaacaagatgactcca
cctatcaaggatttacttccgaggttgacacccattcttaaaaacaggcacgagaaagta
caagagaattgtattgacctcgtgggcagaattgctgacagaggggcagaacatgtggga
gcgagagaatggatgcgaatctgttttgagctgcttgaactgttgaaggcccacaaaaag
gccatcagaagagctaccgtcaacacctttggttacattgccaaggctattggtcctcag
gatgttctcgccactcttctcaacaatctcaaagtacaggagcgtcagaacagagtgtgt
acaactgtggccattgccattgtggcggagacgtgctcgccgttcaccgttcttcccgcg
ctcatgaacgagtaccgcgttcccgaactgaacgtgcagaatggcgtcctcaagtcgctg
tccttcttgtttgaatatatcggggaaatgggaaaagattacatctacgctgtcacgcct
ctgctagaagacgccctcatggacagagatctggttcacagacaaactgcctgtgcagcc
atcaagcacatggctttgggcgtggccggatttggctgcgaagatgcgctcacccatctc
gttaattacgtgtggccgaacatctttgaaacttcgcctcatgttatcaacgctgtcatg
gaatctatcgagggaatgagagtggccttaggtccctctagggtccttcattactgtttg
cagggtatgttccaccccgcgcgaaaagttcgagatgtgtactggaagatctacaacagc
ctgtatattggatctcaggattcgctagtggccgcctatccaacagcaccaagcgacgaa
aagaataattttgtccgatcagaactcacttatttcctttga

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