Acropora millepora: 114965855
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Entry
114965855 CDS
T06134
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
amil
Acropora millepora
Pathway
amil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114965855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amil03041
]
114965855
Enzymes [BR:
amil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114965855
Spliceosome [BR:
amil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
114965855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
PWI
AAA_19
Flavi_DEAD
nSTAND3
T2SSE
AAA_30
nSTAND_NTPase5
TsaE
SRP54
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114965855
NCBI-ProteinID:
XP_029201392
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MAELSTWVSDKLHDVLGFSDKYTVEYLIGLAKSSPSPESLVQRVSEGLNVDDKVATFASE
LWSKFPHATGPAEHPYRAKERALIEQRQKYMGYALLSDDDDDDKLIKTNESKKDRKRKHL
RRKTESSSSDEDSLRGNDASKAVGNDSDSDEWEKEEKERKKDLEERDAFANRLKQKDKEK
TRNILERSDKKAFEEAAKRLKIDEEDRKKMIPDLRKKARREYVKKRRVDKLEMLQEDIRD
DEYLFEESQLSKREKKEKEYKKKVYNLALEHSKAGELEKVQRYEMPQENQKPAKYDEETV
EELGPNYEQKKWEEDKLGYAVMKFGAKDAKHKSKAKDYDLVVDEDQINFVMAEQIPGTKE
KQEPEMNEYQKKRLTIEETQKSLPVYPYKEDLIQAIRDHQVIIIEGETGSGKTTQIPQYL
HEAGFTKNKMKIGCTQPRRVAAMSVAARVSEELGTKLGNEVGYSIRFEDCCSERTIIKYM
TDGMLLREFLSEPDLAGYSVLIIDEAHERTLHTDVLFGLVKDITRFRSDLKLLISSATLD
ADKFSQFFDDAPIFRIPGRRFPVNIYYTKAPEADYLEAVVVTVLQIHVTQPIGDILVFLT
GQEEIEASQELLQERTRKLGSKIKELIILPIYANLPSDLQAKIFEPTPPGGRKVVLATNI
AETSLTIDGIIYVIDPGFCKQKSYNPRTGMESLVVTPISKASANQRAGRAGRVAAGKCFR
LYTAWAYKNELEENTIPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPAETLIIALEQL
YALGGLNHHGELTKLGRRMAEFPVDPMLSKMLIASEKYKCVEEILTITAMLSVNNAIFYR
PKDKVVHADNARVNFFRAGGDHLTLLNVYDQWAETGYSTQWCYENFIQHRSMKRARDVRE
QIEGLMERVEIEITSNPHDSVPIRKAITAGFFYHTARLGRSGQYRTVKHQQTVMIHPNSS
LFQEQPRWVIYHELVFTTKEFMRQIIEIENKWLLEVAPHYYKAKEIEDSSSKKMPKTAGV
TKEQARSTT
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttatcaacttgggtatcagacaagctgcacgatgttctcggcttctcagat
aagtacactgtggaatacctcataggacttgccaaaagctcaccaagtcctgaatctttg
gttcagcgagtatctgaaggcttaaatgtcgatgataaggtggcaacatttgcttcagag
ctatggtcaaaattccctcatgcaactggacctgccgagcatccttacagggcaaaagaa
agggctctgatcgagcagaggcagaagtatatgggttatgctttattatcggatgatgat
gatgatgacaaactgattaaaactaatgaatctaagaaggatcgaaaacgaaaacattta
agaaggaaaacagaatcttctagttcagatgaggattccctcaggggtaatgatgcgtca
aaagcggttggcaatgatagtgattcagatgaatgggaaaaagaggagaaagaaagaaag
aaagacctggaagagagggatgcttttgccaacaggcttaagcaaaaggacaaagagaag
acaaggaacatattggaaagatcagataaaaaggcttttgaggaggcagctaaaaggtta
aagattgatgaagaggatagaaagaaaatgattcctgatcttaggaagaaggcccgtcgt
gagtatgtcaagaaacgaagggttgacaagcttgaaatgcttcaagaggacattcgagac
gatgagtatctgtttgaagagtctcagctcagtaaaagggaaaaaaaggaaaaggaatac
aagaaaaaggtatacaacttggccttggagcattctaaagcgggagaactcgagaaagtt
caacgatatgagatgcctcaggagaatcaaaagccagccaaatatgatgaagaaacagta
gaagagctgggacctaattatgagcagaagaaatgggaagaggataaacttggctacgct
gtcatgaaatttggtgcaaaggatgccaagcataagagtaaggccaaagattatgattta
gttgttgacgaagaccaaataaattttgtaatggctgagcagattccaggaacaaaggaa
aaacaggaaccagaaatgaatgagtatcagaagaaaagattgacaattgaagagactcaa
aagagtttaccagtatatccatacaaagaagacctcatccaggctatcagggaccatcag
gtgattattattgaaggagagactggatcaggcaaaactactcagattccacagtatctt
catgaagcaggttttactaaaaataagatgaaaattggctgcacacagccacgtcgagtg
gcggccatgagtgttgctgcaagagtgtcagaagaactgggaacaaagctgggaaatgag
gttgggtacagcatacgatttgaagattgttgttccgaacgaactataataaagtacatg
accgatggaatgctgctgagggagttcttaagtgaacctgatcttgctggctacagcgtc
ttaatcattgatgaagctcatgagcgcaccctacatacagacgtcttgttcggtttggtg
aaggacatcactcgtttcagaagtgaccttaaactgcttatatcaagtgcaacgctcgat
gccgacaagttctctcagttctttgacgacgctcctatctttagaatccctggtcgacgt
ttcccagttaacatctattacactaaggctccggaagctgactatctggaggctgttgtg
gtcacagtgttacagattcatgtgacgcagcccataggtgacatcctggtatttcttacc
ggccaagaagagatcgaggcttcccaggaactcttgcaagagaggacgcgcaaactggga
tcgaagattaaagagcttattattttaccaatctatgctaacctgccttcagatttacaa
gccaagatatttgagcccacccctcctgggggaagaaaggttgttttggccacaaatata
gcggagacatctttgacgattgatggaatcatttatgttattgatcctggattctgtaaa
cagaagagctacaatccgcgcacaggaatggagtctctggttgttacacccatctcaaaa
gcctcagccaatcagcgtgctggccgtgctgggcgcgtagctgctggcaaatgttttcgg
ttgtacactgcgtgggcttacaaaaacgaactggaggaaaatactatacccgagatccaa
agaacgaatttggggaatgttgtgcttcttcttaagagcttgggcatcaatgatttgatt
catttcgattttatggacccccctccagcagaaaccttgattattgctcttgaacagctg
tatgctttaggaggactgaatcaccacggggaactgaccaagcttggacgtcgtatggcc
gagtttccggttgatccaatgctgtccaaaatgttaattgcatcggagaaatacaaatgt
gtggaagagattcttacaatcacagccatgctgtctgtcaacaacgccatcttttaccgt
cctaaggataaagtcgtacacgcggacaacgcgcgcgtgaattttttccgcgctggaggt
gatcacctgacgctgttgaacgtgtacgaccagtgggcggagactgggtactcgacgcag
tggtgttatgagaattttattcagcatcgttccatgaagagagcacgtgatgtcagggag
cagatcgaagggctaatggagagagtagagattgagatcacttccaatcctcatgactcg
gtgccgattagaaaggcaatcaccgcaggattcttctatcacacagccaggctcggcaga
agcggtcagtacaggacagtcaaacatcagcagacggtcatgattcacccaaatagcagt
ttattccaggagcagcccagatgggtgatttaccacgagcttgtgtttacgacgaaggag
tttatgagacagattatagagatcgagaacaagtggcttctagaggtggcaccccattac
tacaaagccaaggaaattgaagacagttcgagtaagaaaatgcccaagacagcgggggtg
acgaaagagcaggccaggtcgacaacgtga
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