Acropora millepora: 114966087
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Entry
114966087 CDS
T06134
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
amil
Acropora millepora
Pathway
amil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114966087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114966087
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114966087
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
114966087
NCBI-ProteinID:
XP_029201674
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Position
5:27090608..27108453
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AA seq
626 aa
AA seq
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MADVEDDEKFLYGGDESQAKEVETSVVVKQEPKDEDEDITENGQTMAEDDSKEAGELSNE
DDDDDDDDDDDDEDDVQVTIGEINTSVPPYGAPYTTPSNWTFKPGTGATSVKERTAIGKD
GKGINVDAVGTVNGVSIHEFDLDSVDDKPWRKPGADITDYFNYGFTEDTWKQYCEKQRRM
RMEPQLPKKILNFVHPPPVDPVIMPDGRPRKAGPPPERKLEGSIDVIGGEGSRVESRRRR
EDDVMAPMMGEGMNSEVGPPHPGMMNKKQFPPGPPGGPHDMPSVSGAPPFIPPRAEPPMG
PPPRPPHGMPMHVPPGAPMPPGMPPPFRPMGPDGTHRPEGAPPGMPPPGMPPMPGMAGPP
PHGFPPEMGMPPDVMPPPFDPAAFAARGGMGMRGRGRGRMPVPGPQGVPGMPPTGEFPQG
MDERGHRPFEEGNPFFPGDPSQAFHPLMGPPPGMPWDAGIGRGFPPGFREGFPGAIARQG
SESPGDDDSEYGSSDDDRKRDRDSHRRRDRDRERSREHRERTRDRSPRRERDRDRDRRDR
ERRHRDRDKGDRDRREERSSRKDREKSKEQREKKRHSKNASSEASGGPEEGELVSSKKKS
RRTRESKEAKNENSEPREEGQRTPTP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgaggacgacgaaaagttcttgtacggaggtgacgagtcccaagctaag
gaagtagaaacaagtgttgtagtaaaacaggaaccaaaagatgaagatgaagatatcaca
gaaaatggccaaacaatggctgaagatgactccaaagaagcaggtgaactgagtaacgaa
gatgatgatgacgacgatgatgacgatgatgatgatgaggatgacgtccaagtcactatt
ggagaaataaatacttcagtgcctccctatggtgctccttataccacaccaagcaactgg
accttcaaaccaggcacaggagctacctcagttaaggagagaacagcaattgggaaagat
ggcaagggaatcaacgtggatgctgttggcactgtcaatggagtttctatacatgaattt
gacttagattcagtggatgataaaccatggagaaaacctggtgctgacatcactgactac
ttcaattatggatttacggaagacacgtggaagcaatactgtgaaaaacaaagacgcatg
agaatggagccgcaattgcccaagaaaatattaaattttgtccatcctccacccgtggac
cctgttattatgcctgatgggaggccaagaaaagcagggccaccacctgagcggaagttg
gaaggaagcattgatgttataggaggggagggttctagagttgaaagtcgcaggcggaga
gaagatgacgtaatggcgccaatgatgggtgaggggatgaattccgaggtagggccacca
caccctgggatgatgaacaagaaacaatttccaccaggtcctcctggaggtccgcacgac
atgccctctgtgtctggtgcccctcctttcattcctccgcgtgctgaacctccgatgggt
cccccaccaagaccaccccatggtatgcccatgcatgttccacccggggcccctatgccc
ccggggatgcccccgccgtttcgacccatgggcccagatggaactcatcgccccgaaggt
gcgccgccagggatgccacccccagggatgccccctatgcccgggatggcaggcccgcca
ccccacggatttcctccagagatgggaatgccaccagatgtgatgcctccgccttttgat
ccagcagcgtttgccgctcgtggtggcatgggcatgcgtggtagaggccgtggtcgaatg
ccagtcccaggtccccaaggggtaccgggaatgccgccaactggagaattccctcaggga
atggatgaaagagggcatagaccattcgaagaaggcaacccattctttcctggagatcca
agtcaagcgttccatccactgatgggtccacctcccggcatgccttgggatgcgggaata
ggtcgtggttttcctcctggatttcgggaaggttttcccggcgcgattgccaggcagggc
agcgagagtcctggtgacgacgacagcgaatatggaagcagtgatgatgacagaaaaaga
gatcgtgattcacatagacggcgggacagagatcgggaaagatcccgagagcatcgggaa
agaactcgtgatcgttcgccgcggagagagcgtgatcgtgacagggatagacgtgacaga
gaacggagacaccgtgaccgtgacaagggagaccgagataggagagaggagcggtcgtct
cgtaaagatagagaaaagtccaaagaacaacgagaaaagaaaagacacagcaagaacgca
agttccgaagcctcaggcgggcctgaagagggagaactggtatccagcaagaaaaagagt
agaaggacacgtgagtcgaaagaggcaaagaacgaaaattctgaaccccgggaagagggt
cagcggacccccacaccctaa
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