Acropora millepora: 114966260
Help
Entry
114966260 CDS
T06134
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amil04040
]
114966260
04091 Lectins [BR:
amil04091
]
114966260
Ion channels [BR:
amil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114966260
Lectins [BR:
amil04091
]
C-Type lectins
Others
114966260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
PLAT
GPS
Ion_trans
DUF5621
Motif
Other DBs
NCBI-GeneID:
114966260
NCBI-ProteinID:
XP_029201884
LinkDB
All DBs
Position
13:complement(11383880..11393887)
Genome browser
AA seq
1518 aa
AA seq
DB search
MSVLKVTNSNSECGKGLGPTVKTMIATTILNTFTVITPSSLDMSRTIMAVINLATTVAVW
EAGGGNGENSAGLALKMTQTAVNELSNTLSDPEEPFTPELEEAAVGVTTCLQNVLRSSSD
TSHAVGNAARDSSSSKDNVEKACKALNDMSDAFFGRLVSSEQTVIKSNEMSLALKKVSSE
DVKGLAMEERSSSFKLPSGVDSIGSGDINAQMTVLSFNPFSWDNRSKAVQSSVTSLELKN
RQHKLNVSNLDDDIVIIIPISSPSESSKSTNEESDSAHLFLKPDQMAVHSYYAELAEVPV
SVQIGLQHDGQTIELIAKFGSRPSIHDFDHKFTLLLQSKCSISKQGDETSCLIAESSVSV
VPSKPGLLFIGLLRNYNSTRIAENATEHSIKRRSCFGHKRQKRACVGFKEPPPKGVFKTL
VPQYDPSTDLNYTISITQSTCLYWSDENDKWTSDGCKVGSRSNLTHLICRCNHLTSFGGS
FIQAPNPIDFKKVFDAFENLTESGNISVLVTICCAFILYLVVIVFARRADKRDECKMCPP
KLVNVIESGTYFYDVAVGTGVWKNSATTANVWITIHGESNKLHLVPLKSGIEYGETFARG
SINGFVLVTNESLGTLKAVTLEHDNTGENPSWFVENVTIRDRQTEESWTFLINRWLAVEK
DDGLIEVTVDNKTTVTFANQVRSRFGRKIADSHLWMSVFSKATSSSFTRVQRASCCLSIL
FSAMIANAMFYNIGGETEGTIQIGPFKFSLRQIIVGVQSGLIVAPVNILIVLLFKSSKPR
NMKRRRYDEFGPVETLVDELRDAGFTLPHFFIYLGWFLCFGTTMTAATFTFFYSLMWGKE
LAEQWISSILVTNAQDIFVLQPSKIMVVVIVISLLLTRKKPRTNDCEQEASDGGMCEDDI
DFLLDNPKERYKRLRLEATRQRTKKERRLAGMTKDIVLHLLFVFLLAIVCYGNKNSYRLL
MNESLLYPFPKFEKVTDRLKLLSWLRGEFLPNMYSQPWYNGFKDNKDAYTENKMSIIIGM
PWMRQLRIQRSSCKSFTSVISDCYHEYSREEEDTGPISLPGWKPLPHNTSWPKALNLCPV
PWRYQSSVEINNGPIRGTYNSYGGGGYVAVMGYDEQTANRVLNETFRHGWVDRRTRAVIL
EFAIFNANLNLLSIGTYFYEVLAAGAAFTTRRAETLELYSTDSGSLMFYLICQFLFMVMA
LYYLAIMLFHLYQQRLRFFMSVWNMVDFFMIVFSVLSMAFYMIRSKSILKSVKTIQANPY
DIIHFHAAVSWLNWENGAMAAAIFMVTLKLLNLIRFNPHIIYLFSSFRQSVDVQLSYVGI
FVVVFNAFVISGMNLFGRSVGHYSGYMHAVMSQFEFLLGKAVPIDGLRSENEFIGPSFAL
TYNLAMVIILMNMLVSVLNEAYTDAKTQVDKNAEELEMARFIYDRFTEIIQGSKHRPEFK
LFCDEATLGNMCVSDAEPFCLNSESLLRCTEDRLKQIEKRVAVLARRTDKISDELIKEED
DFLDLVQSRADLTQSDFD
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcttaaggtcacaaattcaaactcagaatgcggaaaaggattaggccctacg
gtcaaaacaatgatcgccactacaatcctcaacacgtttacggtgataacgccctcgagc
ctcgatatgtctcgcacaataatggcagtgatcaacttagccactacagtagcagtatgg
gaagcaggaggaggaaatggagaaaattccgcgggtcttgctttaaaaatgacacagact
gcggtaaatgagcttagcaataccttaagcgacccagaggaaccgttcacccctgaacta
gaggaagcagcggtgggtgttacaacatgccttcaaaacgtcctgaggtcgtcttccgat
acaagccatgcagtcggaaatgctgcacgtgattcttcctcttcaaaggacaatgttgaa
aaggcttgtaaagccttaaacgacatgagtgacgcatttttcggccgccttgtatcatct
gaacaaactgtgattaaaagcaatgaaatgtccttagctcttaaaaaggtctcctcggag
gatgtcaaaggcctcgccatggaagaacgatcgtcaagtttcaagttaccaagtggcgtt
gatagcatcggtagtggtgatataaacgcgcagatgaccgttctaagcttcaatcctttc
tcatgggacaacagaagcaaagctgtccaatcaagcgtcacaagtcttgaacttaaaaac
cgacaacacaaactaaatgtgtcaaatctagatgacgacatcgtgataatcattcccatc
tccagtccaagtgaaagcagtaaaagcacaaatgaggagtctgactcagcacatcttttt
ctcaagcccgaccaaatggcggtccattcttattacgcagaacttgcggaagtaccagtg
tccgtacaaataggcctgcaacacgatggacaaaccattgagttgattgcaaaatttgga
tcaagaccttccatacacgacttcgatcacaaatttactctcttgcttcaatctaagtgc
tcgatcagtaaacaaggtgatgagacttcttgcctaattgcagagagctctgtttcggtt
gttccatcaaagccagggcttctgtttattggtcttttacgaaattacaattccactaga
attgctgaaaatgccactgaacattcaataaagagaagatcatgttttggtcataagcgt
caaaaacgggcgtgtgtcggcttcaaggagcctccgccaaaaggtgtctttaaaacactc
gttccgcaatatgatccatccacagatctgaactacacaatctctattacccaatcaact
tgcttatattggtctgatgaaaatgacaagtggacttcggatggttgcaaggttggatcc
aggtcaaatctaacgcatctgatctgtcgctgcaaccacttaacgtcgtttgggggaagt
tttatccaggcgccaaatccaatagactttaaaaaagtattcgacgcgtttgaaaacttg
actgaaagtggcaatatatcagtattggtgacaatatgctgcgcatttatactttacctt
gttgtaattgtctttgcaagaagagctgacaagagagatgaatgtaagatgtgtccccct
aaactggttaatgtaattgagagtggaacttatttctacgacgtagcagtcggaactggt
gtttggaaaaactcagcaacaacggcaaatgtatggataaccattcatggcgaatcaaat
aaacttcacctagtcccactgaagagcggaattgagtacggtgaaacatttgctcgcggt
agcataaacggctttgtacttgttaccaatgagtccttaggaactttgaaggccgttact
ttagaacacgacaacacaggagagaatccgtcttggtttgtggaaaatgttaccatcaga
gacagacagacagaagaatcatggacgtttctaataaaccgatggcttgcagttgaaaaa
gatgatggcctaatagaagttactgtagacaacaaaacaactgtgacatttgcgaatcaa
gttcgctcgcgttttggacgaaagattgccgacagtcatctgtggatgtctgtgtttagt
aaagcaactagcagttcatttactcgcgttcaaagagcatcttgctgtctctcgattttg
ttcagcgcaatgatagccaatgctatgttctataacattggtggagaaacagaaggaacc
atacaaatcggaccattcaagttttctctcagacaaatcattgttggagttcaaagtgga
ttaatagtcgcaccggttaacattctcatcgtcctgctgttcaaatctagtaagccaaga
aacatgaaacggagaagatacgatgaatttggacctgtggaaacacttgtggatgaattg
agggacgctggtttcacgctgcctcacttcttcatatacttaggctggtttctctgcttt
gggacgacgatgacagcagcaacttttactttcttttatagcttaatgtggggtaaggaa
cttgctgagcagtggatctcgtcgatattggtaacaaatgctcaggacatatttgtcttg
caaccatcgaaaattatggtagtggttattgtgatttcgttactcttgactcgtaagaaa
ccgaggacgaatgattgcgagcaggaagccagtgacggtggtatgtgtgaggatgatatt
gacttcttgctggataacccaaaagaacgctataagcgattgagactggaggctacacgc
cagcgaacaaaaaaggagagaagactagcaggcatgacaaaggacattgtccttcactta
ctatttgtgtttctcttggcgattgtttgttacggaaacaagaacagttaccgccttctc
atgaacgagagtttgctgtatccgtttccaaagtttgaaaaggtgaccgaccgacttaaa
cttctgagttggttgagaggagagttccttccaaatatgtacagtcagccctggtataat
ggatttaaagacaataaggacgcatatactgaaaataagatgtccataattataggaatg
ccatggatgagacagctcagaattcaaaggagttcctgcaaatcattcacaagtgtgata
tcagattgctaccacgaatattctagggaagaagaagatactggaccaataagtcttcct
ggctggaaacctcttcctcataatacctcatggccaaaggctctcaacctgtgtccagta
ccttggagatatcaaagtagcgttgaaatcaacaatggacccataagaggtacgtacaat
tcttatggcggcggtggatatgttgctgtgatggggtatgacgaacaaactgctaatcgt
gttctaaatgaaacttttagacacgggtgggtggatcgtcggacacgagctgtgatatta
gagttcgctatcttcaatgctaatctgaatcttctcagcattggcacctacttctatgaa
gttctggctgcgggtgctgctttcacaacaagaagagctgagacactggagttgtacagt
actgattcaggatctcttatgttctacctcatttgccaattcctctttatggtcatggct
ctctattacttagcaattatgctcttccacctttaccaacaacgtttgcgatttttcatg
tccgtttggaatatggtcgacttcttcatgattgttttttcagtgctttcgatggccttt
tacatgatcagatccaagagtatcttaaaaagtgttaaaactattcaagccaatccatac
gatatcatacatttccacgcagcagtgagctggcttaattgggaaaatggtgcaatggcg
gcagccatatttatggttacactaaagttgctcaacctcattcgtttcaacccccatatt
atatacctgttttcatcgtttcgccagtccgttgacgtacaactctcgtacgttggaatt
tttgttgttgtattcaatgccttcgttatttctggaatgaacctttttggtcgctcagtt
ggacactattcgggctacatgcatgcggttatgtcccaatttgagtttcttttgggaaaa
gctgttcctattgacggcctccgaagcgaaaatgagttcattgggccttcttttgctctc
acatacaatctggccatggtgataatcctaatgaatatgttggtttctgtgttaaacgag
gcttatactgacgccaaaacgcaggttgacaaaaatgcggaggagctagaaatggcacgt
tttatttacgaccgatttacagaaatcatccaaggaagcaaacatcgacctgaattcaaa
ttattctgtgatgaagcaacgttgggtaacatgtgtgtgtccgatgcagagcccttttgt
cttaactctgaaagccttttacggtgcactgaagatagacttaaacagattgaaaagcgg
gttgcggttctagctcgccgaacagataaaattagtgatgaacttattaaggaagaggat
gatttcctggacttagtccagtcacgtgcagatctgactcaaagtgattttgattaa
DBGET
integrated database retrieval system
