Acropora millepora: 114966317
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Entry
114966317 CDS
T06134
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
amil
Acropora millepora
Pathway
amil03022
Basal transcription factors
amil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114966317
09124 Replication and repair
03420 Nucleotide excision repair
114966317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amil03021
]
114966317
03036 Chromosome and associated proteins [BR:
amil03036
]
114966317
03400 DNA repair and recombination proteins [BR:
amil03400
]
114966317
Enzymes [BR:
amil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114966317
Transcription machinery [BR:
amil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114966317
Chromosome and associated proteins [BR:
amil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114966317
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114966317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
Histone_HNS
nSTAND3
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
114966317
NCBI-ProteinID:
XP_029201951
LinkDB
All DBs
Position
13:19304970..19320560
Genome browser
AA seq
759 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQYSYMMELKRTLDAKGHCLLEMPSGTGKTISLLSLIVAYI
LTKPLELSKLIYCSRTVPELEKVLEELKVLLEYYEKETGQIPKLTGLGLSSRKNLCIHPE
VSAEREGKKVDGKCLGLTASYVRLRHKEDKSVPVCPFYESFDSHGKEEKLAPGVYNLDDL
KVVGGNRGWCPYFLARHAIYHANVVVYSYHYLLDPKIADLVSKELEKSSVVVFDEAHNID
NVCIDSMSVTISRRTLDKSHGNVEALARTIRSIKERDAGKLREEYNKLVQGLRDINAARE
TDMVLSNPVLPDEVLEEAVPGNIRQAEHFVNFMRRFVEYLKTRLRVQHVIQESPPSFLQH
VFQQVCIERKPLRFCAERLSSLLHTLELPDVQDYGPLTLIANFATLVSTYNKGFNLIIEP
FDDRTPTIPNPILHFSCMDASIAIKPVFDRFQSVVITSGTLSPIDMYPKILDFRPVTMAT
FTMTLARICLCPMIVGRGNDQVAMTTKFETRDDMSVIRNYGNLLAEMSGVVPDGIVCFFT
SYQYMEAVVSIWHDQGIISNIQRNKLLFIETQDAAETSLALHNYQKACENGRGAILLSVA
RGKVSEGIDFDHHFGRAVIMFGIPYVYTQSRILKARLEYLRAQFNIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFFKVDKRGKLPKWIQEYLKEGVCNLSIDEAVQISKRF
LRQMAQPFDKGDQLGLSLLTVEQVESEEFQKRILQTAVA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaatatcgacggtcttcttgtatatttcccctatgactacatatacccagag
caatactcttacatgatggagttaaaaagaactttagatgccaagggccactgtctcctt
gagatgccttctggaactggcaaaacaatttcattgctgtccttgattgttgcttatatt
ttgaccaaaccacttgagttgtcaaaactcatttactgctctcgtactgttccagagtta
gaaaaggttctagaggagcttaaagttcttttggaatattatgaaaaagaaactggacag
atacccaagctaacaggtttaggactcagctccagaaaaaatctttgtattcatcctgag
gtaagtgcagaaagagaaggcaagaaagtggatgggaagtgtttaggtttgacagcatca
tatgttcgcttgaggcataaagaagacaagtctgttcctgtgtgtccattttatgagtct
tttgacagtcatggcaaggaggagaaacttgcaccaggagtatataacttggatgatctc
aaggtggttggtggcaacaggggttggtgtccgtattttctggcacgacatgccatttat
catgcaaatgttgttgtgtacagctatcattacttgttggatccaaaaatagctgacctt
gtttccaaagaactggagaaaagctctgttgttgtgttcgacgaagcccacaatattgat
aatgtatgcattgattcaatgagtgtgacgatatcaaggagaacattagacaagagccat
ggcaacgtagaagcattggcaagaacaataaggagcattaaggaacgagatgctggtaaa
ctaagggaggagtacaacaaacttgttcaaggcctacgtgacataaatgctgcaagagaa
actgacatggttttatcaaatccagtgcttccagatgaggtgttagaggaggctgtccct
gggaatatacgtcaagctgaacattttgtgaattttatgaggagatttgttgaatattta
aagacacgactcagagtacaacatgtcatacaagaaagtccgccatcatttttacaacat
gtattccagcaagtctgcattgagagaaaacctctcaggttctgtgccgagcgattgagc
tccctgttacatacattggaactcccagatgttcaagattatggacctcttacactgatt
gcaaattttgccacccttgtaagcacttacaataaagggtttaatcttattattgaaccc
tttgatgacagaacgccaactatacccaaccctattctccacttcagttgtatggatgcc
tccattgctataaagcctgtgtttgatagatttcagtctgtagtcatcacatcagggacc
ttgtcaccaatagatatgtatcccaagattcttgactttcgccctgtcaccatggcaaca
tttactatgactcttgccagaatttgcctttgtcccatgattgtgggtaggggaaacgac
caagttgccatgacaacaaagtttgaaacacgagatgacatgtctgtaatccgtaactat
ggcaaccttttggcagaaatgtcaggagtggtgcctgacgggattgtctgtttcttcacc
agttaccagtacatggaggcagttgtttccatttggcacgatcagggtattattagcaac
attcaaagaaacaagctgcttttcattgaaacacaggatgcagcagaaaccagtttagcc
cttcataattatcaaaaggcttgtgaaaatggaagaggtgctatattactttcagtagca
agaggaaaagtttccgagggaatcgatttcgatcaccactttggtagggcagtcataatg
tttggtattccttatgtctatacacaaagcagaattttaaaggcgagacttgagtatctc
agagcacagtttaacatcagagaaaacgacttccttacttttgacgctatgaggcatgca
gctcagtgcgttggtcgagccatccgaggaaaaacagattatgggatcatggtatttgct
gacaagaggttttttaaagttgataaaagaggcaaactaccaaagtggattcaggaatac
ttaaaagagggcgtctgcaacctctctattgacgaagcagttcaaattagtaagaggttc
ctgaggcaaatggctcaaccttttgataagggtgatcaacttggcctgtcgcttcttact
gtggagcaggtggaatctgaagagtttcagaaacgaatcttacagacggctgttgcttaa
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