Acropora millepora: 114966555
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Entry
114966555 CDS
T06134
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
amil
Acropora millepora
Pathway
amil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114966555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amil03041
]
114966555
Enzymes [BR:
amil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114966555
Spliceosome [BR:
amil03041
]
Complex C
Other components
Step II factors
114966555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
DEAD
WHD_HA2
GIPC1_GH2
AAA_22
AAA_19
RSRP
nSTAND3
PRP38_assoc
EAP30
nSTAND_NTPase5
AAA_16
AAA_30
PhoH
RsgA_GTPase
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
114966555
NCBI-ProteinID:
XP_029202298
LinkDB
All DBs
Position
2:complement(30508124..30564458)
Genome browser
AA seq
1176 aa
AA seq
DB search
MEEINQLEQLSLVSKICTELDNHLGINDKDLAEFIIMLSEKNPTLEKFRAALADNGAEFP
ESFTSNLLRLIQKMKPEKPGTVDIKPGTSVDSEKITSVVSEKRSAFPGLCIPDDIEQENE
RPEEDEQVASTALSELEALMSKAKSSSLESVRERQRSRSRSRSKDRDRQRHRSESRSPSR
DRDRKKYRERWTRREEKSKSRRKDEARDKHHGLTPTEKLPCVTPVVGQIYKGKVTTIMQF
GCFVQLEGLRGRHEGLVHISQLRREGRVANVSDVVHRGERVRVKVLSMPGDKISLSIKDV
DQDTGEDLNPTRLRGDGEMARNPDRPVGIPVVPIFDDDEPSAKRKVQRLSSPEKWEVKQL
ISAGVLDKADHPEFDEETGVLPKDDHSDEDVEIELVDEEPPFLRGQTKLSVSMSPVKIVK
NPDGSLQRAAMTQSALAKERRELKQAHREAQADSIPKDIGKLWIDPVPNADGIKPVFAQD
MRGIGLANDDMPEWKRATFGGNKASYGKKTNLTILEQRQGLPIYKLRQELLKAVLENQVL
IVIGETGSGKTTQITQYLAEEGFLSTGKLACTQPRRVAAMSVAKRVSEEYGCRLGQEVGY
TIRFEDCTSTETKIKYMTDGMLLRECLLDSDLNQYAIVILDEAHERTISTDVLFGLLKKT
VKKRPDLKLIVTSATLDAVKFSTYFFEAPIFTIPGRTFPVEILYTKEAETDYLDASLITV
MQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRI
FDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKSGIDALVVTPISQAQA
KQRSGRAGRTGPGKCYRLYTERAYRDEMLPTAVPEIQRTNLASTILSLKAMGINDLLSFD
FMDPPPMETMISAMEQLHSLSSLDDEGLLTRLGRRMAEFPLEPQLSKMLIQSVHLGCSDE
VLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQSEGDHLTLLAVYNSWKNNKFSNPWCFE
NFVQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKTTSRVQKAITSGFFRNAARKDPQEGY
RTVTDNQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTVDPKWLVEFAPAFFKTG
NPTKLSKRKRQERLEPLYNRYEEPNAWRISRAFRRR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatcaaccagcttgagcagctatctcttgtttctaagatttgtacggagttg
gataatcacttgggcatcaacgacaaggaccttgctgagttcataataatgctgagtgag
aaaaaccccactttggaaaagtttagagcagctttagcagacaatggtgcagaatttcca
gagtcattcacttccaatctattgagattgattcaaaaaatgaaacctgaaaagccagga
acagttgatattaaaccaggtacatctgtggacagtgaaaaaataacttcagtggtgagt
gagaagcgctctgcattccctgggctctgcattcctgatgatatagaacaggaaaatgag
agaccagaagaggatgaacaagtggcatcaactgctcttagtgagctggaagctcttatg
tccaaggcaaagtcctcctcattggaatctgtcagggaaaggcaaaggtcacggtcaaga
agccgaagtaaagacagagacaggcaaaggcacagatcagagtctagaagcccaagtaga
gacagagacaggaaaaagtacagagaaagatggacaagaagggaagagaaatcaaagagt
aggagaaaagatgaagccagagacaaacaccatggccttacacccacagagaaattgcct
tgtgtaactccagttgttggtcagatctacaagggaaaggtgacaacaatcatgcagttt
ggatgctttgttcaattggaaggtttaagaggtcgtcatgaaggcttagtgcacatttcc
cagcttcggcgtgaaggacgagtcgctaatgtgagtgacgttgtacacagaggtgaaagg
gttagggtgaaagttctatcaatgcctggtgacaagatcagtctgagcattaaggacgtg
gatcaagacacaggtgaagacttgaatcccaccagattaaggggagatggtgaaatggca
agaaacccagacagaccagtgggcatcccagtggtacctatttttgatgatgacgagcca
agtgcaaaaagaaaagttcagaggttaagctcaccagaaaaatgggaagtaaagcagcta
atttcagctggtgttttggacaaggccgaccacccagagtttgatgaagagacaggtgtc
cttcccaaagatgatcactctgatgaagatgttgaaattgaattagttgatgaggagcct
ccgtttttacgagggcaaactaaacttagcgtgagcatgagtccagtgaagattgtaaag
aatccagatggctccttgcaaagggctgctatgacccagagtgcattagccaaagaaagg
agagaactcaagcaggcacacagggaggctcaagcagacagcatacctaaagacattggc
aagctctggattgatccagttccaaatgcggatggtatcaaaccagtctttgcacaagac
atgcgaggtatcggattggccaatgacgacatgcctgaatggaaaagagctacatttgga
ggaaacaaagcgtcatatgggaagaaaaccaatttgactattctcgaacaacgacaaggg
ttacccatatacaaactaaggcaagagctattgaaggctgtccttgaaaaccaagttttg
attgttattggagaaacaggcagtggaaagacaacacaaataacccagtacttagcagaa
gaaggtttcctttctaccggcaaacttgcttgcactcaaccccgaagagtagctgcgatg
tctgtagccaagagagtgtcagaagaatatggttgtcgccttgggcaagaggttggctac
acgattcgatttgaagactgtacaagtactgaaaccaaaattaaatacatgactgatgga
atgcttctgagggaatgtctccttgactctgacctcaatcagtacgccattgttatactt
gatgaggcccatgagcgcacaatcagtactgatgttctctttggcttgttgaaaaagact
gtgaagaagcgcccagatttgaagttgattgtgacatcagctacattagatgccgtaaaa
ttctcaacatatttctttgaggctccaatatttacaatccctggccgaacttttccagtc
gagattttgtacacaaaagaagcagaaacagattaccttgatgcttccctcattactgtt
atgcaaatccatttgactgaaccaccaggcgatatcctagtatttttgacaggccaggag
gaaattgacacagcttgtgagatactctatgaacgcatgaagagtctgggccctgatgta
ccagaactaattattttgccagtgtacagtgctctaccatcagagatgcaaaccaggata
tttgatccggctcctccaggcagtcgaaaggttgtgattgctaccaatattgcagaaacg
tcacttactatagatggcatatactatgtagttgaccctggatttgtcaagcagaaagta
tataactcaaagtcaggaattgatgctttggttgtgacaccaatttctcaggctcaagct
aagcaacgctctggtagagcaggtaggacaggacctggtaagtgttatcgcctttacaca
gagcgtgcttacagagatgagatgttgcctactgcagtccccgagattcagcgcacaaac
ctggctagcactatactgtcactcaaagcaatgggcatcaatgaccttttgtcctttgat
tttatggatccaccacctatggagacaatgatttcagctatggaacaactacattctctc
agttccttggatgacgaaggcctactgaccaggttgggaaggagaatggccgaatttcct
ctggagccacaattgtccaagatgttaatccagtctgttcatcttggatgtagtgatgaa
gtattaactatcgtctccatgctgtctgttcaaaacgtcttctacagacctaaggacaaa
caagctcttgctgaccaaaaaaaagctaagttccatcagtctgaaggagaccacttgacc
ttgcttgcagtgtataattcctggaagaacaacaagttctcaaacccttggtgctttgaa
aattttgtgcaggccaggtcgctgagacgagcacaagacatcaggaagcaaatgcttgga
attatggacaggcacaagcttgatgttgtatcatgtggcaagaccacgtcacgcgtgcag
aaggcgataacgagtggtttcttccgcaatgcagcaaggaaagatccacaggaaggttac
cgcacagtaactgataaccaggtggtatacattcacccgtcgagtgcgctgtttaaccga
cagccagaatgggttgtgtatcatgagctagtgcttacaacaaaagagtacatgagggaa
gttaccacagtcgatcctaagtggcttgtggagttcgctcctgcatttttcaagaccgga
aatccaaccaagctgagcaagcgcaagagacaagaaagattggagcctctatataaccgg
tatgaagaacccaatgcttggagaatttcgagagcctttagaagaagataa
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integrated database retrieval system
