Acropora millepora: 114966715
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Entry
114966715 CDS
T06134
Name
(RefSeq) collagen alpha chain
Organism
amil
Acropora millepora
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
114966715
NCBI-ProteinID:
XP_044173549
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All DBs
Position
3:complement(69531..135492)
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AA seq
1395 aa
AA seq
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MLPSNVVLALLLGAALFVFVHGQGPTEAPQRGAPGPRGPNGDLGDQGDPGPKGDPGPPGF
AGDSGNPGQRGDPGDPGPVGEPGPSGGAGSLTSGVKGPDPQAPGGIKGEAGSPGGRGPPG
PPGKRGPPGLAGQRGPTGAPGEQGPRGRNGQPGSPGGPGRDGSDGEAGEKGEAGSPGLQG
SPGPAGIPGLPGDTGFKGDKGPVGFKGNKGDQGVPGERGTTGDPGTPGRDGQPGEPGLIG
PPGKQGRIGPPGQRGPEGPPGEQGNTGGRGRSGLRGSPGTPGAKGDRGEPGGQGDQGETG
EQGQPGEQGPKGDNGRNGNPGRSGASGSKGNMGPVGATGPAGQAGAPGSAGVPGAQGQSG
APGDRGRPGMTGLQGQKGEKGGQGPVGNQGPRGPTGSSGKRGMPGSMGPPGPAGPVGPPG
SGGRRGPPGNDGNPGRKGATGSPGENGRNGLKGDKGGAGLRGQPGQPGAKGPSGQPGVVG
RDGKTGTPGEPGVDGKPGSPGPQGAPGAPGPDGLTGTKGSMGEPGTDGEPGSPGPQGAKG
ETGLAGRRGLTGIPGKQGRQGERGEPGTAGSQGQQGQPGTQGPPGLPGKQGETGEPGESG
EDGTPGPRGERGAQGERGATGMMGPSGDPGEAGIPGADGKAGERGVPGAPGPVGTPGLPG
MPGQQGPMGPIGAKGSKGDVGPTGERGYDGKDGEPGRDGSPGPIGQPGIPGEKGEDGVPG
SDGTPGSRGDSGPRGLPGNPGPPGRPGALGPSGPPGPQGPRGPRGEPGMKGPAGPPGRPG
ATGALGQLGKTGLKGEPGNQGRRGPPGLQGDPGKPGQSGPPGPPGPSGPSGRDGSDGQKG
SSGEPGRPGKDGIPGQPGSNGKDGEPGTPGSDGRAGEIGPSGPIGPKGERGTPGATGPMG
NSGPPGVQGSKGEKGPPGTNGRNGSPGISGSRGAQGPPGAPGSSGQNGVDGGTGENGTNG
RPGLKGESGAPGDPGASGSAGPAGPPGPKGDTGPPGIQGEKGRRGADGIPGKTGEPGPQG
DQGPKGQKGEVGPVGEKGDKGWTGTPGDPGPQGDRGEPGPPGRDGVDGPPGPRGAPGEMG
AVGDPGLNGSMGEPGNKGPDGDLGESGAKGPDGIKGPPGPPGPPGPPGQPGMSEIASYLS
VGNLEKGPGFRLYSSSGEEMPKQKIKAENVLKDLDEKDKEMDSLIAPDGSRKFPAKTCYD
LFLDHGNFESGEYWIDPNGGTVKDAIKVYCDKKKNSSCVYPTNPKISDLVLKSGFESKED
KWLSKAFKKSEEVEYDAHYTQINFLRTLSNYANQNVTYACRNSKAWEDGQHSIKLMGSND
MEYHASSKISLRPTVIMNECANGGKLDKWGKTVLEIDTRERSRLPIVDVSAFDVGREGQD
FKLEIGPACFHHIKY
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgttaccctctaatgtggttttggctcttctgctaggcgcagcgttatttgtatttgtc
cacggacaaggtccaactgaggctccccagagaggtgcacctggacctcgaggacccaat
ggtgatcttggagaccaaggagatcctggtcccaaaggtgatcctggaccaccagggttt
gctggtgattctggtaatcctggacaaaggggagatcctggtgatccaggtcccgtaggg
gaacctggtccctcagggggagcaggtagtctcacttctggtgtgaagggacctgatcca
caggccccaggtggcatcaagggtgaagctggttcaccgggaggaagaggaccacctggt
ccaccaggaaaacgtggtccacctggactcgctggccaaagaggaccgactggtgcccct
ggagaacagggaccacgtgggagaaatggccaaccaggaagccctggaggcccagggcga
gatggatctgatggtgaagcaggagagaagggagaggctggtagtcccggtctccaaggg
tcaccgggccctgctggtatccctggtctaccaggtgacacaggattcaaaggagacaaa
ggacctgtaggatttaagggcaacaagggagatcaaggtgttcctggagaaaggggtacc
accggggacccaggaactcctggacgagatggccaacctggtgagcctgggttgatagga
ccacctggaaaacaaggacgcataggaccgcccggacaacgaggacctgaagggccccct
ggtgaacagggtaacacgggtggcagaggacgaagtggtttacggggttctcctggtacc
cctggggctaagggtgatcgtggtgaaccaggtgggcaaggtgaccaaggggagacgggg
gaacagggacagcctggagaacaaggacccaaaggtgataatggaagaaatggcaaccca
ggaagaagtggagcatctggatccaaaggaaacatgggtcctgtcggagccacgggtcca
gcaggacaggctggcgctcctggaagtgctggtgtgcccggagctcaaggacagtctggt
gctcctggagacaggggtcgacctggaatgactgggttacagggacaaaaaggagagaaa
ggtggacagggcccagtgggaaaccagggaccaaggggacctacaggctcaagtggaaaa
cgggggatgcctggctcaatgggaccccctggacctgctggccctgttggacccccaggt
tctggtggtcgccgtgggcctccagggaatgatggaaatcctggccgaaagggagctaca
ggatctcctggagagaatggacgaaatgggctcaagggtgacaagggaggtgctggtctt
cgtggtcaacctggacaacctggtgctaagggaccttctggacaaccaggagtggtagga
cgagatggcaaaactggtactccgggagaaccaggtgttgatggaaaaccaggatctcct
ggtcctcagggagctcctggagcacctggtccagatggattaacaggaactaagggatca
atgggtgaacctggtactgatggagaaccaggatcaccaggacctcaaggagcaaagggt
gaaactggattggcaggaaggcgtggacttactggaataccaggaaagcagggacgccaa
ggtgaaagaggagaaccaggaaccgcaggatctcaaggacagcagggacaaccaggaaca
cagggtcctcctggcttgccaggaaaacaaggagagactggagaacctggagaaagtgga
gaagatggcacgcctggtccccggggagagcgaggtgctcaaggtgaacgtggagccaca
ggaatgatgggtccctcaggagacccaggagaagctggtatccctggtgctgacggcaaa
gcaggtgaacgaggtgtccctggtgcaccaggccctgttggaacccctggtcttccaggt
atgccaggacaacaaggaccaatgggacctattggtgccaagggatccaagggagatgta
ggtcctaccggtgagagaggatacgatggcaaagatggagaaccaggacgagatggtagc
cctggtccaattggtcagcctgggatccctggagaaaagggtgaagatggtgttccagga
tcagatgggactcctggaagtcgtggtgatagtggccctcgtggtttgcctggaaaccca
ggtcctcctggtagaccgggtgcattgggacccagtggcccaccgggcccccaaggacca
cgtggaccgcgcggagagccgggtatgaaaggaccagctgggcctccaggaagaccaggg
gctacaggtgctctgggtcaattgggtaagacaggattaaagggtgaaccaggaaatcaa
ggtcgacggggaccacctggtctacaaggagatcccggaaaacctggacaaagcggaccc
cctggacccccaggtccatcaggaccttcgggacgagacgggtcagatggacagaagggt
tcctcaggagaaccaggccgacccggaaaagatgggatccctggacaacccggctcgaat
ggaaaagacggagaaccagggacgcctggatcagacggaagagcgggagagattggccca
agcggacctatcggacccaaaggagaacgaggaactccgggcgccaccgggcccatgggt
aactctggtccaccaggagtacaaggatcaaagggagaaaaaggcccacccggaacaaac
ggacgaaatggatcaccaggaatttctggatcgcggggtgcgcaagggcccccaggagct
cccggaagtagcggacaaaatggcgtcgatggtggaaccggagagaatggtactaatgga
cgtccaggtcttaagggagaaagcggcgcacccggagatccaggtgcttctggaagcgcc
ggaccggccggcccccccggacctaagggagataccggaccaccgggtatacagggagag
aagggaagacgtggagcggatggcattccaggaaaaacgggagaaccaggtcctcagggt
gaccaaggacctaaaggacagaagggagaagtgggacctgttggtgaaaaaggagacaag
ggttggactggaacaccgggagaccctggaccccagggtgaccggggtgaaccaggtccc
ccaggaagagatggtgttgacggacctccagggccgaggggtgctcctggtgagatgggt
gccgtaggagatccagggttgaatggttcgatgggtgaacctggaaacaaagggcccgat
ggtgatttgggtgagtctggtgctaagggccctgatggtatcaaaggaccccctggtcct
cctggccccccgggacctccagggcagcccggtatgtcggagatcgctagctacttgtcg
gtaggaaatctcgagaaaggccctgggttccggctatactccagcagtggcgaggaaatg
cccaagcaaaaaatcaaggccgagaacgtccttaaggacttggacgaaaaggacaaggaa
atggactcccttattgctcccgatggctcaagaaagttccctgctaaaacttgttacgac
ctgttccttgatcacggaaatttcgagagtggtgaatactggattgaccccaatggtgga
acagttaaggatgccatcaaggtgtactgtgacaaaaagaagaattcgtcctgtgtctac
ccgacaaatccaaagatctccgaccttgtgttgaaatctgggttcgaaagtaaggaagac
aaatggctgagcaaagcgtttaagaagagcgaggaggttgagtacgacgctcattataca
caaatcaacttcctgaggactctgagcaactacgccaaccaaaatgtgacttatgcctgt
cgaaactccaaggcgtgggaagatggccaacactctatcaaactgatgggctccaatgat
atggaatatcatgcttcttctaagatttccctcagacctaccgtcatcatgaacgaatgc
gctaatggtggcaaattggacaagtggggcaaaactgttttggagattgacacccgagag
aggagtcggctaccgatcgtggatgtgtcggcatttgacgtcggacgagaaggtcaagat
tttaagcttgagattggaccggcctgtttccatcatatcaagtattga
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