Acropora millepora: 114969139
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Entry
114969139 CDS
T06134
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
amil
Acropora millepora
Pathway
amil03440
Homologous recombination
amil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114969139
03450 Non-homologous end-joining
114969139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amil03032
]
114969139
03400 DNA repair and recombination proteins [BR:
amil03400
]
114969139
DNA replication proteins [BR:
amil03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
114969139
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
114969139
BRCA1-C complex
114969139
NHEJ (non-homologous end-joining)
MRX complex
114969139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_29
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
114969139
NCBI-ProteinID:
XP_029205270
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All DBs
Position
1:18316372..18367000
Genome browser
AA seq
1317 aa
AA seq
DB search
MSSLEKMKIQGIRSYSHSEPSIIEFQKPLTLIVGPNGAGKTSVIECLNYMATGDMPPGSK
GNLFVHDPKIAGEMEVRGQIKLKFRDVTGNPIVVTRTLVSEQKGKMVRTRTMEGNIMREV
HGERQSLSSKCADINREMISFLGVSKAVLDNVIFCHQEESNWPLSEGKVLKQKFDDIFAA
TRYIKALDAIRKFRQEQTQTVKEYAIELNHLKANKEKAEQISDELTQTQGKVSATKDKVR
ELNEKLKPVEVKLTDLQSIASDVVRLERKLESLSTERRQLSKVETDLEDKIINLFNGPVE
ELHKIFADFQQKVVEKENSLRRDEGKLQRLGQDQQSLSAEANQLHVEGGRLQQEAHRHKV
NVSDRDKAIVDLANVHNFRGFEKGPFSSDSVVQFLEEMRRKYKNVIDDTKKKRGVFEETL
NTLQQKIDDMKKTQAQCEETIRLKNNFMRENLQKLRQIGQELSRVDASANRLKSLESELQ
KAEKALGDAQEGGSLGMLAREIDELQSEKRKIDNELRQLREEQQAMHMQSKTQAELDMKT
KEKRTKENAIQQIMDLHEEDLKTTLGTRGTSESLHTRLVEHLRVKEKELKETTNKLQNLK
QELSSKQTRKRMIAEDLKGKENRVQERRRQITEACGENDYNTTKELIKNNIDSLQDERGI
IGSFEKIYSKYVSKLESSEVHRNGCPLCHRTFNSNNEIAELVSELKNKIHTLPDRREANE
GSLKKEQKRYDHILQLAPAKEMLESLEKHEIPDVRSKLDAITSEEQSIKDDITELEDLLS
ITESEEQSARKMEPDIRMLAKHKGELRELDRSISLLQSKIHGVARGRTMQSVSSEITEKQ
DKSDSLNTSIDRKRTQLSRLQQQLNELETDVHELKSQKLSLEAQLQKRTHLEQQKAELTA
NNSAFGREIKEAETELSPLAAGLEELQDQKLEVTREKEAADDENRKLLDRIRASGDEVRK
RTDEINRYVSQGGDASLEENEARLREVAERAENLKREKDVVSNEIDKLKEDIAKQQIRAR
ELEDNIQLKSTQEEILNIETKIAALKEELKQYGEHQDLVSERQVLQQQSDALRKDIAHYE
GRLRGFEDDEKRCQRELRSDLYRSADEKHRQQVIAMKTTEMANSDLDKYYKALDRAIMRY
HGLKMAEINKIIKEYWINTYKGNDIDTIEIRSDEEEGSGATKTRRTYNYRVVMIKGDTAL
DMRGRCSAGQKVLASLIIRLALAETFCLNCGILTLDEPTTNLDEENIESLANQLASIIRT
RQQQRNFQLVVITHDEEFVQNLGRADFVDYYFRIYKDDSGYSKIMRQSVAAEESLVD
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctctggaaaagatgaagattcaaggaatccgcagttattcccacagtgaacct
agtatcatagaattccagaagccactgacattgattgttggaccaaatggagcaggcaaa
acgtctgtcatagagtgccttaattacatggccactggagacatgccacctgggagcaaa
ggaaatctatttgtgcatgatccaaagattgctggtgaaatggaagttagaggtcaaatc
aaactgaaatttagggatgttactggaaatcctattgttgtgacacgaactcttgtgtct
gaacaaaagggcaaaatggtaagaacacggaccatggaaggaaacatcatgcgtgaagtc
catggagagaggcaaagcttaagttcaaagtgtgccgatatcaacagagagatgatttcc
ttccttggagtatcaaaggcagtgttggacaatgtgattttctgtcaccaagaagagtcc
aactggccacttagtgagggcaaagttttaaaacaaaaatttgacgacatctttgcagca
acaaggtacatcaaagctctggacgcaattcgaaaatttagacaagaacagactcagact
gttaaagagtatgccatcgagttgaaccatcttaaagcaaacaaggagaaagcagaacag
atatcagatgaactcacccaaactcagggaaaagtttcggcaacaaaggataaagtcaga
gaactgaatgaaaagcttaaaccagttgaggtgaagttaactgatcttcaaagcatcgct
tctgatgtggttcggttggagagaaaacttgaatccttgtctacggaaagaagacaactc
tctaaagtcgaaactgatctggaggataagatcattaacctctttaatgggcctgtggag
gaattgcacaaaatatttgcagattttcagcaaaaagttgtggaaaaggaaaacagcttg
agacgggacgaaggcaaactccagagacttggtcaagatcagcaaagtttgagcgctgaa
gcaaaccaacttcatgtggaaggaggaagacttcagcaggaagctcacaggcacaaagtg
aacgtcagtgatagagacaaggctatagtggatctggcaaatgtgcataactttagaggc
ttcgagaaaggccctttctcaagtgatagtgtagttcagttcctggaagaaatgaggcgg
aaatataaaaatgtgatagatgacacgaagaaaaaaaggggtgtcttcgaagaaacgtta
aacacgctgcagcagaaaattgatgatatgaagaagacccaagcgcaatgtgaagaaact
attcgcctcaaaaacaattttatgagagagaatctgcagaagttgagacagattggtcag
gaattgagcagggttgacgcttcagcaaacaggcttaaatcactcgagagcgagcttcag
aaagcggaaaaagcgcttggtgatgcacaagaaggaggcagtttaggtatgttagcaagg
gagatcgatgaacttcagtctgagaaacgtaaaatcgacaacgagctgcgccagttaaga
gaggaacagcaagccatgcacatgcaatccaagacacaagctgaattggacatgaagaca
aaagagaagaggaccaaagagaatgctattcagcaaatcatggaccttcatgaagaagac
ctgaagacaacacttggcacccgtggaacatcagagagtctccacacaagattagtggag
catctgcgagttaaagagaaagagttaaaagaaaccacaaacaaattacagaacctaaag
caagagttgtcttccaagcaaacgcgcaaacgaatgatcgcagaagacttgaaaggcaag
gagaatcgtgtacaggagcgcagacgacagataacggaggcgtgtggcgagaatgactat
aacaccacaaaagaacttattaagaacaacattgactctcttcaggatgaacgtggtatc
attggttcgtttgagaaaatctattcgaagtatgtgtcaaagttggagagtagtgaggtg
cacaggaatggttgccctctgtgccacaggacattcaatagcaacaatgaaattgctgaa
cttgtttctgagctgaagaacaaaattcacactcttcctgatcgaagagaggcaaacgaa
ggaagtctgaagaaagagcaaaaacgctacgatcacatccttcaacttgctccggcaaaa
gaaatgctggaatctctggagaagcatgaaattcctgacgttaggtccaagttggacgct
ataacctctgaagagcaaagtatcaaagatgacataaccgagctggaagatctcttgagc
attactgaaagcgaagagcaaagtgcaaggaaaatggagccagatattcgcatgctagcc
aagcataaaggagagctcagggaacttgacagaagcatttccttactgcaatccaaaatt
cacggagtcgcccgtggccgtacaatgcagtcagtatccagtgagatcactgaaaaacaa
gacaaatctgattctttgaacaccagtattgatcgcaagcgcacacagttgagccgactt
caacagcaactcaatgaactggagacagatgtgcatgagctcaaatcacagaagctcagt
ttggaagctcagctacaaaaaagaacccatttggagcaacagaaagctgaactcactgcg
aataacagtgcatttggaagagagattaaggaagcagaaacagagctgagccctctagca
gctggacttgaagagttacaggatcagaaactggaagtcacacgagagaaagaagcagca
gatgatgagaacaggaaattgctcgatagaattcgagcaagtggggatgaagtgcggaag
agaactgacgaaataaataggtatgtgtcacagggaggagacgcgtctctggaagagaac
gaagcacgcctacgagaagtggcagaacgagcagaaaatctgaaaagggagaaagacgtc
gtttcgaatgaaatcgataaactgaaggaagacatcgctaaacagcagatcagggcacgc
gagctggaggacaacattcagttgaaaagcacccaagaggaaattcttaacatagagaca
aaaatcgctgcgttgaaagaagaactgaagcagtatggtgaacatcaggatcttgtcagt
gaaaggcaagtattgcaacagcagtctgatgcattgcgaaaagacattgcccactatgag
ggacggttgaggggctttgaggatgatgaaaaacgatgccagagagaattaagaagtgac
ttgtacagaagtgccgatgaaaaacatagacaacaggtcatcgcaatgaagaccactgaa
atggcaaattccgatctggataagtactacaaagcacttgacagggcaataatgcgttat
cacggccttaagatggccgagattaacaagatcatcaaggagtactggatcaatacttac
aaaggaaatgacatagatacaattgaaattcggtcagatgaagaggagggaagcggtgca
accaaaacacgacgaacttacaactacagggttgtaatgatcaaaggtgacactgcattg
gacatgagaggacgctgtagcgcgggacaaaaggttttagcatccctcatcataaggttg
gctttagcggaaacgttctgcctcaactgtggcattcttactcttgatgaacctacaact
aatttggacgaagagaacattgaaagtctggccaaccagttggcgtcaataatcagaact
cgtcagcaacaaagaaactttcaacttgtagtcattacacatgacgaggaatttgtgcaa
aacctcggcagggctgactttgtagactactatttccgaatctacaaggatgacagcggc
tactcgaagattatgaggcagagtgtggctgctgaagagtcgctcgtggattag
DBGET
integrated database retrieval system