Acropora millepora: 114969370
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Entry
114969370 CDS
T06134
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
amil
Acropora millepora
Pathway
amil03013
Nucleocytoplasmic transport
amil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114969370
03015 mRNA surveillance pathway
114969370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114969370
03041 Spliceosome [BR:
amil03041
]
114969370
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114969370
Spliceosome [BR:
amil03041
]
Complex C
Other components
EJC/TREX
114969370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
DUF4398
Motif
Other DBs
NCBI-GeneID:
114969370
NCBI-ProteinID:
XP_029205522
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All DBs
Position
13:10946126..10954395
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AA seq
367 aa
AA seq
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MATVASLQRDLELAKEGLKFVDENIKKLTGRDPSEFRSAAGRRVTLKRDFQDRSGGQGPA
AKRRDSSGTSGRLWSRVVSTRTSQDRNHSSSRLDSEGEEEEEEDTDKPAIQSSVVATPTP
SRLKRDLITKADDKTKSRNRRMFGVLLQGTLQKFKDTNSQKTDKDLRREEINKKLEEAEQ
KEREELSSQRKELFTERRAKQAELRILQRKVDMAELQEEWDKHGEKLSHFIMTKANPPIF
YMPAKHNEKTEKLLEESTRSVKRAMAKRRAEIEEEQELEEEKIRNARFSVSNEGETESKG
KGEGTENVADGDVEMREEMPTVLSGKDEGKRSHSRDPENGVGEERRVREKQQDHSVENMD
EEEGEVD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtagcatcattgcaacgtgatttagaattagcgaaggaggggctgaaattt
gtagatgaaaacatcaagaaactcactggtagagatccgtcggagttcagatcagcagca
gggcggcgtgtgacgttgaagagggacttccaggacaggagcggtggacaaggaccagca
gccaaaagacgagattcatctggcacctcaggaagactctggagccgagtggtgtccaca
aggacttcccaagacagaaatcactcctcctctcgtctggatagtgaaggtgaagaggaa
gaggaagaagatacagataagcctgctatccagtcttcagttgttgctacacctacacca
tctcgtttaaagagagacctcattacaaaagcagatgacaaaacaaagtcaagaaataga
agaatgtttggtgtcttacttcaaggtaccttgcaaaagttcaaagatactaactctcag
aagacagacaaggatttacgtagagaagaaataaacaagaagcttgaagaagcagagcaa
aaggaaagggaagaactttcatcccaaagaaaagagctatttacagaaaggagagcaaaa
caagctgaactgagaatcttacagagaaaagttgatatggctgagctgcaagaagaatgg
gataagcatggagagaaactgagtcatttcataatgacaaaagcaaatcctcccattttc
tacatgccggccaagcataatgaaaagacagaaaagctacttgaggagtcaacaagatct
gtcaaaagggcaatggccaaaagaagggcagaaattgaagaggaacaggaactagaagaa
gagaagattaggaatgccaggttttctgtttccaatgagggtgagactgagagtaaaggg
aaaggggagggtacggagaatgtagctgatggcgatgtggagatgagagaggagatgcca
acagtattgtcgggcaaagatgagggaaagaggagtcacagtagagatcctgagaatggg
gttggagaagagaggagggtaagggaaaaacaacaggaccatagtgtggaaaatatggac
gaggaagagggagaagtggactag
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