Acropora millepora: 114970141
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Entry
114970141 CDS
T06134
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
amil
Acropora millepora
Pathway
amil03022
Basal transcription factors
amil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114970141
09124 Replication and repair
03420 Nucleotide excision repair
114970141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amil03021
]
114970141
03400 DNA repair and recombination proteins [BR:
amil03400
]
114970141
Transcription machinery [BR:
amil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114970141
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114970141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
114970141
NCBI-ProteinID:
XP_044184501
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All DBs
Position
12:3999175..4016723
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AA seq
542 aa
AA seq
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MADRETVLLEVINTKHKKNGGVLRLLSNTLAWIPHGSDSPKLSCAYSEIKVQRISPEGSS
KIQIQLVLHDGNSFTFQFTSEPQSNAKKERDDAKDLLAQLIPAHRKKSNKELEEKNRMLK
DNPELFQLYKDLVVSNVITAEEFWANRGKAIQAVQTDQAIGLSSALLADMQPESSGCNEV
KYNLNVDTIEAIFKTYPAVKKKHQEVVPHEMPEKDFWTKFFQSHYFHRDRVSSRTTTGDM
FTECAKEDEHEQLKRRLAALKDPLLDLTGASPVPDEGYGQAAELVDSKNSTASQGLFRRL
NHHSLMVLETSTDRSSTSAEDNRSVENGHAEDGIPPAKKRRLREMVEFDDLTEEQVTDLP
SLKIADSTKFSEGLIPVVTKDQGSLHAKRCFADNSVALKGSRSEVEHWQPNLPGALPSAM
ACHVLTEMSPGGSLMSTTSETSMQHLVSSSLQKELKSQYNSLSELLRHFWSCFPVKTQLL
EDKMVRIGQSLEKYRDAKLQQFRNQLPSENSHLANHLVEMLDSALFKYRTWLEKKSASRL
TR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgggaaactgttctcctcgaagtgataaatacaaagcataaaaagaatggt
ggagtgctacgcctcctttcaaacaccttagcctggatccctcatggctcagatagtccc
aagctttcctgtgcatactccgaaataaaagtacaacggataagtcctgagggaagttcc
aaaatacaaattcagcttgtgctccatgatggcaactcattcacttttcagttcacaagt
gagcctcaatcaaatgcaaagaaggagagagatgatgccaaggatttgctcgctcagctc
atcccagcacacaggaaaaaatcaaacaaagaactagaggagaagaacaggatgctcaaa
gataaccccgaattgtttcaactatataaagatttggtcgtcagcaatgttatcactgct
gaagaattttgggcaaaccggggaaaggctatccaagctgtacagactgaccaggccatc
ggactgtcctcagcattgcttgcagacatgcagcctgaaagctctggttgtaatgaagta
aaatacaacttaaatgttgacacaattgaagcaatatttaaaacttatcctgcagtaaag
aagaaacatcaagaggttgtgcctcatgagatgccagagaaagacttctggacaaagttt
ttccaatcccactacttccacagggacagagtgagctcaagaacaaccactggggatatg
ttcacagagtgcgcaaaagaagatgagcatgaacaactaaagagaaggcttgctgcattg
aaggatccattgctggacttgactggtgcttcaccagtccctgatgagggctatggacag
gcagcagagcttgtagactccaagaacagtactgcaagccaaggcttgtttagaaggctg
aaccatcacagcttgatggtacttgaaacttccactgataggtccagcacatctgctgaa
gataacagaagtgttgaaaatggtcacgcagaagacggcattcctcctgctaaaaagaga
cgtttacgcgagatggtggaatttgatgatttgactgaagagcaagttactgacctccca
agcttaaaaatcgctgactcgaccaaattttctgaaggtcttattcctgtggttaccaag
gatcagggatctctgcacgccaaacgatgctttgctgataattctgtagctcttaaaggt
agccgaagtgaggtggagcattggcagcccaacctacccggggctctacctagtgccatg
gcttgccatgtgctcacagagatgtcgccaggaggatccttaatgagcaccacttcggaa
acaagtatgcagcatttagtctcctcgtctcttcagaaggagctcaaatcgcaatataat
tcgctgtctgaattgcttcgacatttctggtcttgctttcccgtcaagacgcagttactg
gaagataagatggttcgtattggccagagtcttgagaaatacagagatgccaagttgcaa
cagtttcgcaatcagctaccgagtgaaaattcccacttggcgaaccatttggtagagatg
cttgattctgccctctttaaataccgaacatggctggagaaaaagtcagcttctaggttg
acccgctga
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