Acropora millepora: 114971325
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Entry
114971325 CDS
T06134
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
amil
Acropora millepora
Pathway
amil03022
Basal transcription factors
amil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114971325
09124 Replication and repair
03420 Nucleotide excision repair
114971325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amil03021
]
114971325
03400 DNA repair and recombination proteins [BR:
amil03400
]
114971325
Transcription machinery [BR:
amil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114971325
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114971325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-UDP
TRAF3_RING
zf-RING_2
zf-RING_4
zf-RING_UBOX
zf-RING_6
DNA_ligase_ZBD
Motif
Other DBs
NCBI-GeneID:
114971325
NCBI-ProteinID:
XP_029207699
LinkDB
All DBs
Position
13:complement(20889776..20897349)
Genome browser
AA seq
307 aa
AA seq
DB search
MDDWQTCPRCKTTKYRNPKLKLLVNVCGHKLCETCVETLFTRPSAACPECNTALRRNDFR
IQQFEDLIVEKEVDIRKRILKIYNKLEDDFQTASDPLRAYNDYLEEVESIIWNLANGQDV
EETKKQIDKYKKDNESLIRKNNFKLGREEAMITSQIEEDERLAEQRRMEALLLEKQEKND
KKKENEQFLDRLTRGELPLQDIVAEHASKLQKKSLLFSGRSTQGSSLQKETVAPLPSTEG
SKFVYVAPQVENNGPTAPDMEVLASRGYLRHIRSATRAEKAGGFSSELACGRAIQEAFAG
LYLGIES
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggacgactggcagacttgcccaagatgcaaaacaaccaaatacaggaatcccaagttg
aaacttctggtgaatgtgtgtggccacaaattgtgtgagacttgtgttgagacgctgttc
accaggccctcagctgcttgccctgagtgtaacacagccttgagacgcaatgactttagg
atccaacaatttgaagatcttatagtcgagaaggaggtcgacatcaggaaaaggatcttg
aaaatttacaacaagcttgaagatgattttcagacagcctctgatccactgagagcctac
aatgattacctagaggaagtggagagtataatttggaaccttgcaaatggtcaagatgta
gaggagacaaagaaacaaattgataaatacaagaaagacaatgaatctctgataagaaaa
aacaattttaaactgggtagagaggaagccatgattacctcacaaattgaagaagatgaa
cgacttgctgagcaaagacgcatggaagcacttttgttagaaaaacaggaaaaaaacgac
aagaagaaagaaaatgagcaattcctggacagactgactagaggagagctccccttgcag
gacatagttgcagaacacgccagtaagctacagaagaaatctttgttgtttagtggtagg
agcactcagggatcttcgctgcaaaaggagactgtcgcccctttgccatctaccgagggc
tctaagttcgtctacgtggctcctcaagtggaaaataacggcccaactgcacctgacatg
gaagtcttagcctcgagagggtacctcagacacatccgaagtgctactcgggctgaaaaa
gccggtgggttttcttctgagctggcctgtgggagagcaattcaagaggcattcgcggga
ctctacctcgggatcgagtcgtag
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